Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02483 ATGTTTGGGTTGATCGGAAGAAAAGCCAATTTTTTTGGAGGATCGGGAAGAAGGTGGTTGAGCTTGGCAGCAACAGCAACAACCACCCCTAGTGGTGGGGCCATGGAGGAGTTGCTTGCGCAACTCCAATCCAATGTCCAGAAGGCTCTTGCTGGTGGAGGACCCGAGGCTGTGAAGAGGAACAGGAGCAGGAACAAATTTCTTCCCCGCGAAAGAATCGATCGCCTTCTTGATCCTGGCTCTTCCTTCCTCGAGCTTTCACAGCTTGCAGGACATGACTTGTATGAAGAGCCCTTGCCTTCTGGAGGGGTTGTTACTGGGATAGGTCCCGTGCATGGGCGACTGTGTATGTTTGTGGCCAATGATCCCACTGTCAAAGGAGGGACTTACTATCCAATTACTGTTAAGAAGCACCTCAGGGCACAGGAGATTGCTGCTCAGTGCAAATTGCCCTGCGTTTATCTTGTTGACAGTGGAGGAGCCTTTCTTCCCAAGCAAGCTGAAGTGTTTCCAGACAGAGAAAACTTTGGTAGAATATTCTACAATCAGGCTGTAATGTCTGCTGAAGGAATTCCTCAAATTGCATTGGTATTGGGCTCATGCACTGCTGGTGGGGCGTATATACCTGCAATGGCTGATGAAAGTGTGATGGTCAAGGGTAATGGCACCATTTTTTTAGCAGGGCCACCTCTTGTTAAGGCTGCCACTGGAGAAGAAGTCTCGGCAGAGGATTTGGGAGGTGCCACTGTGCACTGCAAGACATCTGGTGTTTCTGATTATTTTGCTCAAGATGAACTCCATGCGCTTGCGCTTGGGAGGAATATAATTAAGAATTTGCATATGGCTGGGAAAGATGTCTTGGCAAATGGATTGCAAAATATAAACTATGAATATAAAGAGCCACTGTATGATGTCAATGAACTACGTTCTATTGCTCCCACTGATCTTAAGAAACAGTTTGATATCCGATCAGTCATTGATCGCATTGTTGATGGAAGTGAATTTGATGAATTCAAAAAGTTGTATGGCACTACACTTGTAACGGGATTTGCTAGAATTTTTGGTCAGCCTGTTGGAATTATTGGAAACAACGGGATTTTATTCAATGAATCTGCACTGAAAGGGGCCCATTTCATTGAATTATGCACTCAACGTAACATTCCCCTAGTCTTCCTTCAGAACATCACTGGATTCATGGTTGGCTCAAAATCTGAGGCAAATGGTATAGCAAAGTCTGGCGCAAAAATGGTTATGGCTGTTTCATGTGCAAAGGTACCTAAGGTCACTATAATGGTTGGAGGAAGCTTCGGTGCAGGAAATTATGCAATGTGTGGTCGTGCCTATAGTCCCAATTTCTTGTTCCTTTGGCCTAATTCTAGAATATCTGTGATGGGTGGTGCTCAGGCTGCTGGTGTACTGGCTCAAATAGAGAAAGGCAACAAGAAAAAGCAAGGAATTCAGTGGAATAAGGAAGAAGAGGAAAAGTTCAAAACGAAAGTGGTGGAGGCTTATGAGAGAGAAGCAAGTCCTTATTACTCAACAGCAAGGCTTTGGGATGATGGAATCATTGATCCAGCTGATACAAGAAAAGTCATTGGTCTATCCATCTCTGCCTCCTTGAACCGTGCCATTGAAAAAACAAACTATGGTGTATTTAGAATGTAA 1665 0.4456 MFGLIGRKANFFGGSGRRWLSLAATATTTPSGGAMEELLAQLQSNVQKALAGGGPEAVKRNRSRNKFLPRERIDRLLDPGSSFLELSQLAGHDLYEEPLPSGGVVTGIGPVHGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIAAQCKLPCVYLVDSGGAFLPKQAEVFPDRENFGRIFYNQAVMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGATVHCKTSGVSDYFAQDELHALALGRNIIKNLHMAGKDVLANGLQNINYEYKEPLYDVNELRSIAPTDLKKQFDIRSVIDRIVDGSEFDEFKKLYGTTLVTGFARIFGQPVGIIGNNGILFNESALKGAHFIELCTQRNIPLVFLQNITGFMVGSKSEANGIAKSGAKMVMAVSCAKVPKVTIMVGGSFGAGNYAMCGRAYSPNFLFLWPNSRISVMGGAQAAGVLAQIEKGNKKKQGIQWNKEEEEKFKTKVVEAYEREASPYYSTARLWDDGIIDPADTRKVIGLSISASLNRAIEKTNYGVFRM* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02483 554 PANTHER ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATED 33 554 IPR045190 -
Lapu3g02483 554 FunFam Methylcrotonoyl-CoA carboxylase beta chain 293 554 - -
Lapu3g02483 554 Gene3D - 294 554 - -
Lapu3g02483 554 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile. 35 291 IPR011762 -
Lapu3g02483 554 Gene3D - 24 283 - -
Lapu3g02483 554 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile. 300 546 IPR011763 GO:0016874
Lapu3g02483 554 SUPERFAMILY ClpP/crotonase 250 535 IPR029045 -
Lapu3g02483 554 Pfam Carboxyl transferase domain 61 545 IPR034733 -
Lapu3g02483 554 FunFam Methylcrotonoyl-CoA carboxylase subunit beta 22 285 - -
Lapu3g02483 554 SUPERFAMILY ClpP/crotonase 35 277 IPR029045 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02483 34 554 Acyl Lipid Metabolism Gene Families AT4G34030 81.574 0.0 883
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02483 K01969 - gmx:100777651 1043.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02483 3 46789515 46794772 Lapu3g02483 3 46789515 46794772 ECH