Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02482 ATGTCGTTGCTGCTACTGCCTCAACCTTCCACCACCCTCTCTCCGGTCACCGCCTCCGCCGCCGCACGCACACCCTTCTCCACCGTCACGCCTTCGCGGCAGAGAACGCTCACTCCGAAATCCGCACTTTCAATTTCTCCCCCAGCAACAGCACCCAATGCAATCCCTCCGAAGAAGGTTCTGGTTCCCATCGGTTTGGGCACCGAAGAAATGGAAGCCGTTATCATGATTCACGTCCTGCGGCGGGCCGGCGCTGACGTCACCGTCGCCTCCGTGGAGCCGCAGCTACAAGTAGAAGCCGCGGGAGGCGTCAAATTAGTCGCGGACACGGACATTTCCGCGTGTTCCGATGAAATTTTTGACCTGGTTGCTTTACCCGGAGGAATGCCTGGCTCTGCAAGATTACGGGATTGCGAAGTTCTGCGAAAAATCACAAGCAAACAAGCTGAGGAAAACAGGCTCTACGGAGCTATTTGTGCTGCTCCTGCTGTCACCCTTTTGCCATGGGGCCTTTTGAAGAAAAAGAAGATAACTTGTCACCCTGCATTCTTCGACAGCCTTCCAACCTTTTGGGCAGTTAAATCAAATCTTCAGGTTTCCAGAGGACTCACAACCAGCCCGGGGCCTGGAACTACTTACCAGTTTGCTTTGTCCTTGGCCGAGCAGCTATTTGGGGAGTCTGTTGCGAGGGAGGTTGCAGAATTGTTGTTGATGAGAACGGATGATGATAATGCAACTAAGAAGGAGTTCAATAAAGTTGAATGGTCTGTTGGCCACCACGCCCCAAGTGTCCTCATACCAATTGCACATGGTTCTGAAGAGATTGAAGTAGTGACTGTGGTAGATATTCTAAGGCGAGCAAAAGCTAATGTCATAGTTGCTTCAGTTGAGAAATCTCTTGAAGTTTTGGCTTCACAAGGAACGAAAATTGTTGCTGATATATTAATTAGGGATGCTCAAGAGTCAGCACATGATTTGATTATTCTTCCAGGAGGAACGGCTGGTGCTCAAAGACTAAGCAAATCTAGAATTCTGAAGAATCTTCTTAAAGAACAAAATTCAGCTGGAAGAATATATGGGGCGATCTGTTCTTCACTTGCCATTCTACATAAACAAGGTTTACTTAAGGACAAGAGGGCCACAGCCCATCCCTCTGTCTTAGACAAGGTTGATGAGGAAGCAATAAATGGTGCCAAAGTAGTTATTGATGGCAATTTGATCACTAGTGAGGGACTTGCCACTGTAACAGATTTTGCATTGGCCATTGTGAGCAAGCTATTTGGTAATGGAAGAGCTAGAAGTGTAGCAAAAGGCCTTGTTTTTGAGTATCCTAGGTAG 1338 0.4798 MSLLLLPQPSTTLSPVTASAAARTPFSTVTPSRQRTLTPKSALSISPPATAPNAIPPKKVLVPIGLGTEEMEAVIMIHVLRRAGADVTVASVEPQLQVEAAGGVKLVADTDISACSDEIFDLVALPGGMPGSARLRDCEVLRKITSKQAEENRLYGAICAAPAVTLLPWGLLKKKKITCHPAFFDSLPTFWAVKSNLQVSRGLTTSPGPGTTYQFALSLAEQLFGESVAREVAELLLMRTDDDNATKKEFNKVEWSVGHHAPSVLIPIAHGSEEIEVVTVVDILRRAKANVIVASVEKSLEVLASQGTKIVADILIRDAQESAHDLIILPGGTAGAQRLSKSRILKNLLKEQNSAGRIYGAICSSLAILHKQGLLKDKRATAHPSVLDKVDEEAINGAKVVIDGNLITSEGLATVTDFALAIVSKLFGNGRARSVAKGLVFEYPR* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02482 445 FunFam Protein DJ-1 homolog C 53 241 - -
Lapu3g02482 445 SUPERFAMILY Class I glutamine amidotransferase-like 263 443 IPR029062 -
Lapu3g02482 445 NCBIfam DJ-1 family protein 264 437 IPR006287 -
Lapu3g02482 445 NCBIfam DJ-1 family protein 59 234 IPR006287 -
Lapu3g02482 445 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 57 237 - -
Lapu3g02482 445 FunFam Protein DJ-1 homolog C 256 444 - -
Lapu3g02482 445 MobiDBLite consensus disorder prediction 14 48 - -
Lapu3g02482 445 CDD GATase1_DJ-1 264 426 - -
Lapu3g02482 445 Pfam DJ-1/PfpI family 263 424 IPR002818 -
Lapu3g02482 445 Pfam DJ-1/PfpI family 58 222 IPR002818 -
Lapu3g02482 445 MobiDBLite consensus disorder prediction 14 49 - -
Lapu3g02482 445 SUPERFAMILY Class I glutamine amidotransferase-like 57 239 IPR029062 -
Lapu3g02482 445 CDD GATase1_DJ-1 60 223 - -
Lapu3g02482 445 Gene3D - 257 444 IPR029062 -
Lapu3g02482 445 Gene3D - 50 252 IPR029062 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02482 Lapu-Chr3 46778370 46782530 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02482 - - gmx:100777134 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02482 3 46778370 46782530 Lapu3g02482 3 46778370 46782530 ECH