Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02472 ATGAGCCTCTCCGTTTTCCTCCTGTGGCTTGTCACTATTCCTGTCCTAGCCTACTCTGCCCAAGCTTCTGTCCCACCTATAGGGTATTATTTAGACTGCGGGGGCTCCAAGGAGGTAACGGTAGACAATCTGAAATACGTTTCTGATGGAAGCTACATCAAGGTGGGAAACACCAGCCCCATCAACGAGCCAGGCTTGTTGCCCATACTCTCCACTGTGCGTTACTTTCCCGACGTGTCGGCCAGAAAATATTGCTATTCATTTCCGGTGCTCAAAGGAAGCAAATATCTGGTGAAGACCATGTACTACTACGGGGGTTTCGACGGAGGGAAGCAGCCTCCGGTGTTCGATCAAATCGTTGAAGGGACTAGATGGGGCGTTGTGAACACCACCGAGGATTATGCCAAAGGTCTTAGCTCCTACTTTGACATCACGGTGGTGCCATCTGGGAAGACCTTGAGCGTGTGCTTGGCCAGGAACGAACACACAGGTAGCTCAAGCCCCTTCATTTCGGCCCTCGAGGTCAGGATCTTGGATGCTTCTTTGTATAATCCCACTGACTTCACCAAGCATGCCCTTGTAACCGTCGCTAGAAGTGACTTTGGAGGTGAAGATATCCTTGGTTTTCCAGATGACAAATTCAACCGGATGTGGCAACCATACAAGGACCAGAGTCCTGTTGTGGAAAGCCATTCAAATGTAACTTCTTCAGACTTTTGGAACCTCCCTCCAGTTAAAGCATTCAGCACTGGAATTACCACTAGTCGAGGAAAGAGTCTTGAGATTGAGTGGCCCCCCATGTCCCTTCCAACCACCTACTACTACATTTGCCTCTATTTCCAAGACAACAGACAACCAAGCCCTTACAGCTGGAGGGTTTTTGACGTTTCTATCAATGGCCACCTCTTCTTTTCCAGCCTTAATGCCACGTCCAAGGGTGTCACTGTTTATGCTGCACAATGGCCACTCTCTGGCCAGACCAAAATCTCGTTGATCCCTGCTGTGGGAACACCCGTTGGACCTGTCATCAATGCTGGAGAAATTTATCAGATTCTACCTCTTGGTGGTCGAACTCACACTAGAGATGTAATTGCAATGGAGGATTTGGCAAGAAGCATTCAGAATCCACCTGCTGATTGGAACGGTGATCCTTGCCTACCCAAAGGAAATTCGTGGACTGGGGTTACATGCTCTGATGGTTTTCATGCACGAGTCACGACACTGAACATGACTAATGCCGGGCTTTCTGGGACACTTCCTCCCACCCTTGACCATCTAAGTGCACTAGCTCATCTGTGGCTTGGGGGAAACAAACTCTCAGGCACCATCCCAGATTTGAGTGGACTGAAGGAATTACAAACTCTGCATTTGGAGAAGAACAATTTTGAAGGACCACTTCCTCCATCAATAGAGAAACTCGCGAGACTGCGTGAAATGTAA 1440 0.4868 MSLSVFLLWLVTIPVLAYSAQASVPPIGYYLDCGGSKEVTVDNLKYVSDGSYIKVGNTSPINEPGLLPILSTVRYFPDVSARKYCYSFPVLKGSKYLVKTMYYYGGFDGGKQPPVFDQIVEGTRWGVVNTTEDYAKGLSSYFDITVVPSGKTLSVCLARNEHTGSSSPFISALEVRILDASLYNPTDFTKHALVTVARSDFGGEDILGFPDDKFNRMWQPYKDQSPVVESHSNVTSSDFWNLPPVKAFSTGITTSRGKSLEIEWPPMSLPTTYYYICLYFQDNRQPSPYSWRVFDVSINGHLFFSSLNATSKGVTVYAAQWPLSGQTKISLIPAVGTPVGPVINAGEIYQILPLGGRTHTRDVIAMEDLARSIQNPPADWNGDPCLPKGNSWTGVTCSDGFHARVTTLNMTNAGLSGTLPPTLDHLSALAHLWLGGNKLSGTIPDLSGLKELQTLHLEKNNFEGPLPPSIEKLARLREM* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02472 479 Gene3D - 27 177 - -
Lapu3g02472 479 ProSiteProfiles Leucine-rich repeat profile. 428 450 IPR001611 GO:0005515
Lapu3g02472 479 Pfam Malectin-like domain 31 351 IPR024788 -
Lapu3g02472 479 Gene3D Ribonuclease Inhibitor 361 479 IPR032675 -
Lapu3g02472 479 SUPERFAMILY L domain-like 362 478 - -
Lapu3g02472 479 Pfam Leucine rich repeat N-terminal domain 372 398 IPR013210 -
Lapu3g02472 479 PANTHER OS07G0107800 PROTEIN-RELATED 30 470 - -
Lapu3g02472 479 FunFam Leucine-rich repeat receptor-like kinase 361 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02472 Lapu-Chr3 46661974 46664655 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02472 44 472 Receptor kinase-like Gene Family AT5G59680 29.054 2.26e-52 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02472 - - gmx:100803695 830.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02472 3 46661974 46664655 Lapu3g02472 3 46661974 46664655 ECH