Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02457 ATGGCCGATGATCTCTCTTCCTTCGCCAAGGATGTTTTGCTTGCGAAGGGTTTGAAGAGTTCTACGTTTGTGTGGAGGCTGGTTGTGTTGACCCTTGCAATGGTCTGTGGCGTGTATATATGTTCAATTTGTCTGAAGCAGATAGGCACTGGCAGCAACATTGCTTTTCTGGACAAGAAGGTTGTTCAAAAGCCTTGCCCAGAACCTAACATTGAACCTTGGGAGATTCCTTATGTGCACTACCCTAACCCCAAAACTTACAGCAGGGCGGAATGCGCTTGCCACCCTGTGCGCTATTTTGCTATTTTGTCAATGCAGAGATCTGGGAGTGGATGGTTTGAGACGTTTTTAAACAGTCATGATAACATAAGCTCGAATGGGGAAATTTTTTCGGTTAAGGTGAGAAGGAGCAACATGTCAACAATAACAGAGACTCTGGATACAATTTATAATCTAGATTGGTTAAGTAGTGCTTCAAAAAATGAGTGCACCACTGCTGTTGGCTTGAAGTGGATGCTTAATCAGGGATTGATGCAGCATCATGAACAAATTGCAGAGTACTTCAGAATACACGGTGTTTCACTCATATTTCTTTTCAGAAGGAATCTTTTGCGCCGGATGGTTTCCGTACTTGCAAATGAATATGATAGGAATGCTAAGCTATTAAACGGGACTCACAAATCTCATGTTCATTCACCCAAGGAGGCAGAAGTACTTGCAAAATACAAGCCTGTAATAAATTCAACATTGCTGATTGGACAACTTAGACAAGTGAATGAAACCACCACCAAAGCCTTGGAGTATTTCAAGAGCACCAGGCATATTATTCTGTACTATGAAGACGTGGTAAAAAACCGCACTAAACTAAGGGATGTTCAGGATTTTCTAAAGGTTCCTCAAATGGATTTGAAGAGCCGTCAGGTGAAGATACATAAGGGGTCCTTATCTAGCCAAGTTGGAAACTGGAACGATGTAAGCAAGGCACTAACAGGAACACCATTCGAGAATTTCATCCGTGAAGATTATCGCAGGTTGTTTTAG 1041 0.4207 MADDLSSFAKDVLLAKGLKSSTFVWRLVVLTLAMVCGVYICSICLKQIGTGSNIAFLDKKVVQKPCPEPNIEPWEIPYVHYPNPKTYSRAECACHPVRYFAILSMQRSGSGWFETFLNSHDNISSNGEIFSVKVRRSNMSTITETLDTIYNLDWLSSASKNECTTAVGLKWMLNQGLMQHHEQIAEYFRIHGVSLIFLFRRNLLRRMVSVLANEYDRNAKLLNGTHKSHVHSPKEAEVLAKYKPVINSTLLIGQLRQVNETTTKALEYFKSTRHIILYYEDVVKNRTKLRDVQDFLKVPQMDLKSRQVKIHKGSLSSQVGNWNDVSKALTGTPFENFIREDYRRLF* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02457 346 Gene3D - 97 324 IPR027417 -
Lapu3g02457 346 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 8 343 - -
Lapu3g02457 346 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 341 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02457 Lapu-Chr3 46475158 46487966 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02457 - - gmx:100799665 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02457 3 46475158 46487966 Lapu3g02457 3 46475158 46487966 ECH
Lapu9g02169 9 36428119 36429928 Lapu3g02457 3 46475158 46487966 ECH
Lapu2g00575 2 5004080 5009112 Lapu3g02457 3 46475158 46487966 PCT