Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02343 ATGGCATGGTATAATTGGATAAGGGTAGGCGTATATATTGAAATTATGCGTACATTTAGCAGGTTGAAAAAATTGGTGAAGATGCCATACCCCAAAAACATGAACGAGGAAGCCAAGGCCAAAGCCAGAAAACCCAAACCCAGTTTCGTTTCACGCATTACCACCACTTCCCAGACACTCTTCTCCGCCATGGCGCGAAAACATCTTCTCAAGCAAACCCTAGCCACGCTCTTCCTCCTCTTCGTCCTCTACGCAATCTTCAACGCCTTCTTCCACCCCACCGATTCCTCGGCCTTCGACTCCACCTTCTCCTTCAACTCCGCCTCCTCCGTCCTCCTTGCTTCCGGCGGCCCCAAATCCCCCACTGTAAAGGTCTTCCTTTACGATCTCCCCCGCAGGTTCACCCACGGCGTCATCCGCCACCACGCCCTCGCTCGTGGAGCACGCTTCACCGACGACCACGATGACGTCTCCTCGCTCAAGTACCCTGGCCACCAGCACATGGCCGAGTGGTACCTCTTCGCGGATCTCTCCCGGACCGATCCTGGACAATCAGGCTCGCCTGCGGTTCGCGTCACGGATCCCGAGGAGGCCGATTTCTTCTTCGTGCCGTTCTTCTCGTCGCTGAGTCTCATCGTGAACCCGCCTCGACCTCCCGGCTCGGGTGCCAGTTTGGAGAAACCGATCTACAGCGACGAGGAGAATCAGGAGGCTCTGGTGGAGTGGCTGGAGGAGCAGGAGTATTGGAAGAGGAACAACGGGAGGGACCACGTGATCGTGGCTTCGGATCCGAATGCGATGTACCGGGTCATCGACCGGGTCAAAAATTGCGTGCTGCTTGTCTCCGATTTCGGGCGGTTGCGACCCGACCAGGGGTCGCTGGTGAAGGATGTCGTTGTGCCCTACTCGCACCGCATCAGAACGTACGCTGGTGATGTCGGTGTCGCCGATCGCAACACCTTGTTATTTTTCATGGGCAATCGGTATCGCAAAGAGGGAGGGAAAATCCGTGATACACTCTTTCAAATTCTAGAAAATGAAAAGGATGTCATAATAAAGCATGGAGCACAATCCAGAGAAAGTCGGCGGGCTGCTTCGCAAGGAATGCACACATCAAAGTTCTGTTTACATCCTGCAGGAGATACTCCTTCAGCCTGCCGACTGTTTGATGCTATAGTTAGCTTGTGCATTCCGGTCATTGTCAGTGATAGTATTGAGTTGCCTTTTGAAGATACTATAGACTACAGAAAATTTGCTGTGTTTGTAGAAACTACTTCTGCTATAAAGCCAGGATATTTGGTGTCAAAATTGAGAGCTGTGTCCCAAGACAGAGTCTTAGAATACCAAAAAGAACTAAAGGAGGTTAAGCGATACTTCGAATATGAAGAACCCAACGGGACAGTTAATGAGATATGGCGCCAAGTTTCAAAAAAACTACCCTTGATTAAATTGATGATTAACCGTGAGAAAAGGCTATTCGGAAGGGAATCGGTATGCTCTTGCGTATGTACAAACCAGACTACGGTTAGAAGCCTATAG 1539 0.5088 MAWYNWIRVGVYIEIMRTFSRLKKLVKMPYPKNMNEEAKAKARKPKPSFVSRITTTSQTLFSAMARKHLLKQTLATLFLLFVLYAIFNAFFHPTDSSAFDSTFSFNSASSVLLASGGPKSPTVKVFLYDLPRRFTHGVIRHHALARGARFTDDHDDVSSLKYPGHQHMAEWYLFADLSRTDPGQSGSPAVRVTDPEEADFFFVPFFSSLSLIVNPPRPPGSGASLEKPIYSDEENQEALVEWLEEQEYWKRNNGRDHVIVASDPNAMYRVIDRVKNCVLLVSDFGRLRPDQGSLVKDVVVPYSHRIRTYAGDVGVADRNTLLFFMGNRYRKEGGKIRDTLFQILENEKDVIIKHGAQSRESRRAASQGMHTSKFCLHPAGDTPSACRLFDAIVSLCIPVIVSDSIELPFEDTIDYRKFAVFVETTSAIKPGYLVSKLRAVSQDRVLEYQKELKEVKRYFEYEEPNGTVNEIWRQVSKKLPLIKLMINREKRLFGRESVCSCVCTNQTTVRSL* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02343 512 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 120 459 IPR004263 GO:0006486|GO:0016757
Lapu3g02343 512 Pfam Exostosin family 121 436 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02343 Lapu-Chr3 44823521 44827451 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02343 K23200 - gmx:100783737 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02343 3 44823521 44827451 Lapu3g02343 3 44823521 44827451 ECH