Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02320 ATGGCTCAAACTCAACCATCTTCACGTCACTCCCTTCTGCTTATCTTAGCATGCACCCTTTTCCGACAACTTTACGCTTCCTACACCACCAAAATCGGCATCAACTATGGCACGGTGGCTGACAACCTCCCGCCGCCCTCCACGGTCGCCACCTTCCTCAAATCTCAAACCACCATCGACCGCGTCAAAATCTTCGACGCCAACCCCGACAAGCTCCGCGCCTTCGCAGGCACCGGAATCTCCGTAACTGTCACGGTGGCCAACGCCGCCATCCCCTCCCTCTCGAAGCTACCAGCCGCGCAAGCGTGGCTCTCCGAAAACATCCTCCCCTTCCTCCCGGAAACCTCCGTGACGCGTATCGCCGTCGGAAACGAGGTCCTCGCGACCTCTGACAAAACCCTAATCGCGCACATTCTCCCAACTATGGAATCCTTCCACGAAGCGCTCACCCTCGCCAACCTCACCAACGTCCAAGTCTCCACCCCTCACTCACTCGGGATCCTGGCCTCGTCGGAGCCTCCCAGCGCCGCCACTTTCCGTCGCGGATACGACAAAGCCATATTTGCGCCGATTCTGGACTTCCACCGGCGAACCAAGTCCCCCTTCATGGTCAACCCGTATCCGTTCTTCGGATTCGACCCGAGCCGACCAGAGAGCCTGGACTACGCGCTCTTTAAGCCAAATGGCGGCGTTTGGGATGCGGCGACTGAGGTGAACTACACGAACATGTTCGACGCTCAAATGGACGCGGTTTTCTCGGCGATGAAGAAACTCGGGTATGATGATGTGGAACTGGTGGTGGCGGAAACGGGTTGGCCCTCTGTTGGTGACCCGAATGAAGCGGGTGCGAGTTTTGACAATGCGGCGTCGTATAACGGGAATCTTATGAAGCACGTTAACTCTGGGAAAGGGACCCCTCTTATGCCTAACAGGACTTTTGAGACTTTCATCTTCTCTCTGTTCAATGAAAATCTGAAGCCCACAGTTTCTGAGTGTAATTATGGTTTGTTTAATCCCGATCTTACCCCTGTTTACGACGTTGGCGTTTTCACTGCCAAACAGGCATTGGGTCCCACATCTAGCCCTAGGGCATTAACACCCTCAGAGTCACCTTCTTCTTCTTCGTCATGGTCTTCAAAGAAGAAATGGTGCATGCCGAAAAGGGATGCCACTGAAGCAGCGTTGCAGGCCAACATTGACTTTGTTTGTAGCTTAAGTGGAATAGAGTGTGAGCCCATTAAGGATGGTGGGCCATGCTTCGAGCCCAACACAGTTAGGTCCCATGCGGCATATGCTATGAACGCATATTACCAAACATCTGGTGGTCACGATTTCGACTGCGATTTCCGCCACACCGGACTCATCACTCTCACCGACCCTAGTTCCGAGACGTGTAAGTATCCTGATGCTCCTGGGCTGAAGGCCAGAGCGCCCGATACAGCTGGCTCACTAAGACGTGCCTTTCACAGAGCGCTCTTGTTGATTAGTATTCAAATTCTAATTTGTTTCACTTTTTTCTAA 1521 0.5332 MAQTQPSSRHSLLLILACTLFRQLYASYTTKIGINYGTVADNLPPPSTVATFLKSQTTIDRVKIFDANPDKLRAFAGTGISVTVTVANAAIPSLSKLPAAQAWLSENILPFLPETSVTRIAVGNEVLATSDKTLIAHILPTMESFHEALTLANLTNVQVSTPHSLGILASSEPPSAATFRRGYDKAIFAPILDFHRRTKSPFMVNPYPFFGFDPSRPESLDYALFKPNGGVWDAATEVNYTNMFDAQMDAVFSAMKKLGYDDVELVVAETGWPSVGDPNEAGASFDNAASYNGNLMKHVNSGKGTPLMPNRTFETFIFSLFNENLKPTVSECNYGLFNPDLTPVYDVGVFTAKQALGPTSSPRALTPSESPSSSSSWSSKKKWCMPKRDATEAALQANIDFVCSLSGIECEPIKDGGPCFEPNTVRSHAAYAMNAYYQTSGGHDFDCDFRHTGLITLTDPSSETCKYPDAPGLKARAPDTAGSLRRAFHRALLLISIQILICFTFF* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02320 506 Gene3D Glycosidases 30 355 - -
Lapu3g02320 506 FunFam glucan endo-1,3-beta-glucosidase 7 378 468 - -
Lapu3g02320 506 MobiDBLite consensus disorder prediction 358 380 - -
Lapu3g02320 506 Pfam Glycosyl hydrolases family 17 32 347 IPR000490 GO:0004553|GO:0005975
Lapu3g02320 506 SMART X8_cls 382 467 IPR012946 -
Lapu3g02320 506 Gene3D - 376 470 - -
Lapu3g02320 506 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 21 453 IPR044965 GO:0004553|GO:0005975
Lapu3g02320 506 FunFam Glucan endo-1,3-beta-glucosidase 14 30 355 - -
Lapu3g02320 506 SUPERFAMILY (Trans)glycosidases 32 348 IPR017853 -
Lapu3g02320 506 ProSitePatterns Glycosyl hydrolases family 17 signature. 263 276 IPR000490 GO:0004553|GO:0005975
Lapu3g02320 506 Pfam X8 domain 382 453 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02320 Lapu-Chr3 44519647 44522751 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02320 13 355 Miscellaneous Gene Families AT3G46570 64.162 8.42e-155 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02320 - - vra:106766036 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02320 3 44519647 44522751 Lapu3g02320 3 44519647 44522751 ECH