Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02118 ATGGCATTGTTGCTACAAACGCATTACTCTGTCTCTGGATGCTCACGGCGTTACCCTTATCACTTCCCAAAGCCTTATTATCATAACCCATTTCTCATAATCCCGGCCATATCCACCAAACCCCTATCGTCATTTCATGTCGCAATTTCATTCTGCATTCACCGCACTCCCTCACACCGTTCGCCGCCCTCACCCACTTCCTCCGCTTCCCACCGCCAGATACCTCCACCAAAGCCACCTCTCAAGGCTTTTGCGGGCCTGGCTGCCTCCGCCGTGCTGTTTCTTTGCTTCGGCGTTCGCCTGTGCTTGGCCTCTTCGCCGCCTCTACCCACCGCTCCTCCCCTTGTTCAAGAGGAGCAAACTGTTCGAGATGATCATGATGGAAGAAAAGAAGACGACAAAGAAACTGTAGTAGATAAAGAATTAGAAGAAGCTTTTAATACCTGGAAATCTAAAACATTTGCATTGACTGTTCCCCTGAAAGTTGTTGCTCTACGCGGTTCTGTACCTCCTTCATGGATCAAGGACTTCATAAATTCTCAAGGGAGGAGAATGAAGTTTAACGTGAAGTATTATGCAAGTCTTGAGAGCATCTTTTCTGACCTATCAATTCCCTTTACTAAAGGAAAAATTGGTCCAGCATCTGCTTTGGCTGCAGATATTGTTGGTATTGGCGATTCATGGCTCAAATTTGCTATTAACAAAGCTATAATTGAGCCAATAAGAGATGTAGAAGATCAGGAGTGGTTCGAAAGCTTAAATGAAAAATGGAAGGTATACCTACGCAGGAACTCTGAGGGAGAAATAGATCCTAATGGTGATATATGGGCTGCCCCATATCGATGGGGCTGCATGGTAATAGCATACAAGACAACTAAATTTCAAGAGCATAATCTGGCTCCTGTAGAGGACTGGGCAGATCTTTGGCGACCTGATCTTGCCGGGAGGATTTCAATGGTTGATTCTCCTAGAGAAGTTGTTGGTGCAGTTTTGAAGTATATGGGGACTTCCTATAATACAATTGACATCGATGCTGAAGTCAATGGTGGAAGAGAGGCTGTCAAACAGAATTTGGCTTTACTAGCAAAACAGGTTCGACTCTTTGATAGTTCAAACTATTTAAAAGCTTTTGGAGTTGGAGATGTGTGGGTAGCTGTTGGATGGAGTAGTGATATTATTCCTGCTGCTAAACGCCTGTCTAATGTTGCTGTTGTTGTTCCGAAGTCTGGAGCGAGCTTATGGGCAGATCTTTGGGCAATTCCGGCTGCATCTAGGATTGAAACAAACCAGATTGGCGGACGGGTCAGGGGACCATCACCATTAATCCATCAGTGGATAGAGTTTTGTCTGCAATCTGCAAGATCACTCCCCTTTAAGCAAGAGGTGATCCCAGGTGCCTCTCCCTCGCATCTTCAAGGTCATCCAGTCCATGTGCCCATCGAGTTAACTAATGGTAGGCCGAAGCTAAAAGGTAACCTAGTCGATGGAGCACCTCCACCAGAGATCTTAGAAAGGTGTGAGTTTCTAGAGCCATTATCTAATTCAACATTGTCAGATTACCATTGGTTGATTACTTCTATCCAGGAACCTGGACATGGATTGATACACAAAATGTATCATAATATCATATCAGTGGGTAAATTTTCTCGGTAA 1653 0.4471 MALLLQTHYSVSGCSRRYPYHFPKPYYHNPFLIIPAISTKPLSSFHVAISFCIHRTPSHRSPPSPTSSASHRQIPPPKPPLKAFAGLAASAVLFLCFGVRLCLASSPPLPTAPPLVQEEQTVRDDHDGRKEDDKETVVDKELEEAFNTWKSKTFALTVPLKVVALRGSVPPSWIKDFINSQGRRMKFNVKYYASLESIFSDLSIPFTKGKIGPASALAADIVGIGDSWLKFAINKAIIEPIRDVEDQEWFESLNEKWKVYLRRNSEGEIDPNGDIWAAPYRWGCMVIAYKTTKFQEHNLAPVEDWADLWRPDLAGRISMVDSPREVVGAVLKYMGTSYNTIDIDAEVNGGREAVKQNLALLAKQVRLFDSSNYLKAFGVGDVWVAVGWSSDIIPAAKRLSNVAVVVPKSGASLWADLWAIPAASRIETNQIGGRVRGPSPLIHQWIEFCLQSARSLPFKQEVIPGASPSHLQGHPVHVPIELTNGRPKLKGNLVDGAPPPEILERCEFLEPLSNSTLSDYHWLITSIQEPGHGLIHKMYHNIISVGKFSR* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02118 550 PANTHER SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN 85 527 - -
Lapu3g02118 550 Pfam Bacterial extracellular solute-binding protein 219 452 - -
Lapu3g02118 550 MobiDBLite consensus disorder prediction 119 136 - -
Lapu3g02118 550 MobiDBLite consensus disorder prediction 113 136 - -
Lapu3g02118 550 Gene3D - 283 432 - -
Lapu3g02118 550 SUPERFAMILY Periplasmic binding protein-like II 160 425 - -
Lapu3g02118 550 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 303 317 IPR001188 GO:0015846|GO:0019808|GO:0042597
Lapu3g02118 550 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 274 290 IPR001188 GO:0015846|GO:0019808|GO:0042597
Lapu3g02118 550 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 321 340 IPR001188 GO:0015846|GO:0019808|GO:0042597
Lapu3g02118 550 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 407 426 IPR001188 GO:0015846|GO:0019808|GO:0042597
Lapu3g02118 550 CDD PBP2_PotD_PotF_like_1 159 525 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02118 - - gmx:100781794 920.228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02118 3 41095724 41103526 Lapu3g02118 3 41095724 41103526 ECH