Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02114 ATGCCCATATCCTCAGAACTCCCTGAGGAAATGGCCCTCACCACCAAGTCCAGAAAATCCACTTCACCTTCAAATTTTTACTTTTGCACCACTCTTTTCTTCATTGTCCTCTTCACCATACCTGTTCTTTTCCTCCTCCACACCCCAACTACCACCTCCATATGCACCACCCTTGCTTCCTCCCAAACTAAAACTTGGTCAGGTGATCTTCAGTTAGTTGAATTTGCATGGAACCGCCTCTCATTTTTTGAGCACAGCCCACCACCCTTTGCTCTCAAAATTGCTGTCTTCTCCAGGAAGTGGCCTATTGGCACAACCCCTGGTGGCATGGAGCGCCATGCTCACACCCTTCACACTGCTTTAGCACGCCGTGGCCATCAAGTTCATGTCTTTACTTCTCCACCCCAAGATGAAATCACTTCAATCTCATCCTCTGACGTAAACAAAAACAGCCATCAAGAAGGTGCACCTTCTTCCCCTTACCTTCATTTCCATGAAGGTGAGCCTGGCAGGTGGCGCTATAACAAGGCATGGGAGCAATTTGTGGAAGAAAACCGGAGAGAACCATTTGATGTTGTGCACTCAGAAAGTGTGGCCCTCCCTCATTGGCTAGCACGCAACATGTCAAATCTCGCAGTGTCTTGGCATGGCATAGCCCTTGAGAGCTTGCAATCAAGCATTTTCCAGGACTTGGCTCGCCAGCCAGATGAGCCTATGTCCCCTCTTTTCAACAAAAGTATACAGGGTGTTGTGCCTAAGGTGCTGAACGAGATAAGGTTCTTCAGGAATTATGCCCATCATGTTGCTATTAGTGATAGCTGTGGTGAGATGCTCAGGGATGTGTACCAAATTCCTAACAGAAGAGTTCACGTAATACTAAATGGCGTTGATGAGGATGACTTCAGAGAAGATGTAGAATTGGGAAGGGAATTCAGAAGAAAAATTGGCATTCCAGGGAATGCAAGTTTGGTACTTGGTGTTGCTGGAAGATTAGTGAAGGACAAAGGTCATCCTCTGCTTCATGAAGCTTACTCGAGACTTATAAGCAAGTACCCTGATGTGTACTTGATTGTTGCTGGTTCTGGACCATGGGAGAACAGGTACAGGGATTTTGGGAGTCAGGTTCTTGTTATGGGATCGATGAGTCCTTCCATGTTAAGAGCGTTCTACAATGCAATTGACATTTTTGTCAATCCCACACTCAGACCACAAGGACTTGACCTTACATTGATGGAGGCAATGATGAGTGGGAAACCTCTTTTGGCATCAAGATTTCCTAGCATTAAAGGGACTATTGTGGTTGATGATGAATATGGTTACATGTTTTCCCCTAATGTGGAGTCCCTGTTGGAGGCACTGGAAGCAGTGGTAAAGGAAGGACCGCAGAGGCTAGCAAGGAGGGGCAAGGCAAGCCGGGAATATGCTGCCAAAATGTTTACAGCAAAAAAGATGGCCTTAGCATATGAGAGGTTATTCTTGTGTATAAAAAATCACACATTCTGTGCCTATCCTTAA 1515 0.4587 MPISSELPEEMALTTKSRKSTSPSNFYFCTTLFFIVLFTIPVLFLLHTPTTTSICTTLASSQTKTWSGDLQLVEFAWNRLSFFEHSPPPFALKIAVFSRKWPIGTTPGGMERHAHTLHTALARRGHQVHVFTSPPQDEITSISSSDVNKNSHQEGAPSSPYLHFHEGEPGRWRYNKAWEQFVEENRREPFDVVHSESVALPHWLARNMSNLAVSWHGIALESLQSSIFQDLARQPDEPMSPLFNKSIQGVVPKVLNEIRFFRNYAHHVAISDSCGEMLRDVYQIPNRRVHVILNGVDEDDFREDVELGREFRRKIGIPGNASLVLGVAGRLVKDKGHPLLHEAYSRLISKYPDVYLIVAGSGPWENRYRDFGSQVLVMGSMSPSMLRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPLLASRFPSIKGTIVVDDEYGYMFSPNVESLLEALEAVVKEGPQRLARRGKASREYAAKMFTAKKMALAYERLFLCIKNHTFCAYP* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02114 504 MobiDBLite consensus disorder prediction 1 21 - -
Lapu3g02114 504 Gene3D Glycogen Phosphorylase B; 92 304 - -
Lapu3g02114 504 CDD GT4_PimA-like 93 492 - -
Lapu3g02114 504 MobiDBLite consensus disorder prediction 136 162 - -
Lapu3g02114 504 PANTHER GLYCOSYLTRANSFERASE 25 504 - -
Lapu3g02114 504 MobiDBLite consensus disorder prediction 136 157 - -
Lapu3g02114 504 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 93 492 - -
Lapu3g02114 504 Gene3D Glycogen Phosphorylase B; 305 475 - -
Lapu3g02114 504 Pfam Glycosyl transferases group 1 313 469 IPR001296 GO:0016757
Lapu3g02114 504 Pfam Glycosyltransferase Family 4 108 299 IPR028098 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02114 Lapu-Chr3 41040068 41041770 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02114 11 504 Glycosyltransferase AT4G19460 64.072 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02114 - - gmx:100804436 942.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02114 3 41040068 41041770 Lapu3g02114 3 41040068 41041770 ECH
Lapu3g02114 3 41040068 41041770 Lapu3g02114 3 41040068 41041770 PCT