Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02103 ATGGAAAACAATGGGGAAAGCCATAGCAGAAATGGTAGTTTCAGAATGGGGTTTGGGTTGGGTGCGAGCGAGGCAAAAGTTCACACTGTGGTTGAGCTTGGTACTGTTGATAATACACACACTAGTCTTCTCCTAGATGGTGGTGGTGATGGAGATGTCGGTGAGCAGAGAGAGAAACACCACAAACCTCTCACCAACTCTCTCTCTCCTAGGCAGATGAAGTCCCTAGCAGCTCTCTGCGACACCATCATACCTTCCATCGACAACAACGTTGTTGGTTCCTCCGATGAATCTGTTGCCAACTTCTACAAGACTTCAGCTTCCATGGCTGGAACACCTGAGCATCTTGGGATATTGATAAGTGAGAAACTGAAGCACCCAAGTAGATGGCTGCTGCTATTGACATTATGGGTACTCTCTACATGGTTTGGGACGTTGATTCTGTGTGGCATGGAAAGTGTCTCATTAAGGTTTCCCTTCTTCCATAGCTACCCTGAGATGTCTCTGCTGAAACGCCAAAGAGTTATGCAGTGTTGGTCTCTCAGTTACCTTCGTCCCCTTAGGATGTTTTTCAGGACTATCAAGCTTCTCACTCTCCTCGTCTTCTTCACTCAGCTAGATGAAGCAGAAGAAAACCCATCATGGAAGGCAATTGGCTATTGTGGACCTGATCGAGAGTTCAAAGCACGGTTGAAGAACCACTTCTTACATAGAACATCGAAGGGAGAAGAACATAGAAAAAAAGATGATGATGATGAAGATGAAGAAGAGTTCAGAGGTCCTCTTCACAAAGGTCTCGTCCATTTAAATTATCCACGAGACATCATTGCAAATTCTCTAAGAAGATTTGGATTTTCGGTCTCTACCACATCTAAAAAGAATAAGGCTTCTAACCTGTCATCTCCTTCTTTAGTTATCCAATGTGATGCAGTGGTTGTTGGTTCTGGCTCTGGTGGTGGGGTAGTAGCTGGAGTTCTAGCAAATGCTGGTTATAAAGTGCTGGTCTTGGAGAAAGGAAGCTATTGTGCTAGGAACAATCTTTCCCTTCTTGAAGGACCGAGCATGGATCAAATGTACCTCTCCAATGGTTTGGTTGCAACAATGGATATGTCTGTTCTGATACTAGCAGGATCCACAGTTGGTGGAGGGTCTGCAATCAACTGGTCAGCGAGCATTAAAACTCCTCAACATGTATGCAAGGAGTGGTGTGATCGCCATGAGCTTGAACTGTTTGAAAGTAAGTTGTACAAAGAAGCCATGGATGCTGTGTGTGACAAAATGGGAGTCCAATATGAGATTGAAGAGGAAGGGTTCAACAATGAAGTCCTAAGAAAAGGGTGTCTAGAAATGGGATATCACGTGTGCAACATTCCAAGGAATGCTTCATCAGATCACTACTGTGGTTGGTGCTGCATGGGATGTAAGGATGGAAAGAAGAAGAGTACTTCAGAAACATGGCTAGTGGACTTGGTGAAATCAGGCAATGGAGCAATCATCCCAAGTTGTGAGGCCATACAAGTCTTGCATAACAAAAAGAAAGGAAGTGAGAGAAAAATAGCTCGTGGAGTTGCTTTTGCAATAGAATACAAGGGAAAAAGGGACATTTGTGTAGTGGAGTCCAAGGTCACAATTGTAGCCTGTGGAGCACTCAGTACACCAGCTTTACTCAAGAAAAGTGGATTGAAGAATGAAAACATAGGAAAAAACTTGCACCTTCATCCAGTGGCAATGGCTTGGGGCTACTTCCCTGATTCATCTTCACCTAAGATGTGGCCAGAGAAACATAAGAAGAGCTACGAAGGAGGGATTATGACAGCAATGTCCACAGTTGTTGCACAGTTTGACAAAACTGGATATGGTACAGTGATCCAAACACCTTCATTGCATCCTGGTATGTTCTCAATTCTAATGCCATGGACTTCTGGCAAAGATATGAAAGATCGAATGCACAAGTTTTCTAGAACGGCTCATGTATTTGCGCTGGCAAGGGATCAAGGATCAGGGACAGTGAATTCACCTTCTCTTATAAGTTATCAGTTGAAAGGTGTGGACAAAGAGAATTTAGAGACAGGAATTGAGAAGGTGCTGAGAATTCTTGCAGCAGCTGGAGCAGAAGAAATTGGGACCCACAATAACAAGGGAAGGAGCATAAATGTTAAGCAGGTGAGCTATCATGAGTTTGAGAAATTTGTGAAAGAAGAAAGTGCAATGTCTTTAACAGACCTTACAACACCATTGTGTTCAGCACATCAGATGGGAAGTTGTAAGATGGGTAATAATCCAAGTGATTCAGTTGTGAACCAAATGGGAGAGACATGGGAAGTGGAGGGCCTTTATTTGGCAGACACAAGTGTCTTTCCCACAGCTTTGGGTGTGAATCCAATGGTAACTGTTCAGGCTATTGCTTACTGCACAGCACAATATGTTGTTGATGTTCTTAGAAGGAAAAGAAAGTGA 2457 0.4347 MENNGESHSRNGSFRMGFGLGASEAKVHTVVELGTVDNTHTSLLLDGGGDGDVGEQREKHHKPLTNSLSPRQMKSLAALCDTIIPSIDNNVVGSSDESVANFYKTSASMAGTPEHLGILISEKLKHPSRWLLLLTLWVLSTWFGTLILCGMESVSLRFPFFHSYPEMSLLKRQRVMQCWSLSYLRPLRMFFRTIKLLTLLVFFTQLDEAEENPSWKAIGYCGPDREFKARLKNHFLHRTSKGEEHRKKDDDDEDEEEFRGPLHKGLVHLNYPRDIIANSLRRFGFSVSTTSKKNKASNLSSPSLVIQCDAVVVGSGSGGGVVAGVLANAGYKVLVLEKGSYCARNNLSLLEGPSMDQMYLSNGLVATMDMSVLILAGSTVGGGSAINWSASIKTPQHVCKEWCDRHELELFESKLYKEAMDAVCDKMGVQYEIEEEGFNNEVLRKGCLEMGYHVCNIPRNASSDHYCGWCCMGCKDGKKKSTSETWLVDLVKSGNGAIIPSCEAIQVLHNKKKGSERKIARGVAFAIEYKGKRDICVVESKVTIVACGALSTPALLKKSGLKNENIGKNLHLHPVAMAWGYFPDSSSPKMWPEKHKKSYEGGIMTAMSTVVAQFDKTGYGTVIQTPSLHPGMFSILMPWTSGKDMKDRMHKFSRTAHVFALARDQGSGTVNSPSLISYQLKGVDKENLETGIEKVLRILAAAGAEEIGTHNNKGRSINVKQVSYHEFEKFVKEESAMSLTDLTTPLCSAHQMGSCKMGNNPSDSVVNQMGETWEVEGLYLADTSVFPTALGVNPMVTVQAIAYCTAQYVVDVLRRKRK* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02103 818 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 65 817 - -
Lapu3g02103 818 Gene3D - 292 626 IPR036188 -
Lapu3g02103 818 MobiDBLite consensus disorder prediction 51 65 - -
Lapu3g02103 818 MobiDBLite consensus disorder prediction 47 67 - -
Lapu3g02103 818 Pfam GMC oxidoreductase 677 804 IPR007867 GO:0016614
Lapu3g02103 818 Gene3D - 735 817 IPR036188 -
Lapu3g02103 818 SUPERFAMILY FAD/NAD(P)-binding domain 306 814 IPR036188 -
Lapu3g02103 818 PIRSF Lg_Ch_AO 55 818 IPR012400 GO:0046577
Lapu3g02103 818 Pfam GMC oxidoreductase 309 575 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02103 Lapu-Chr3 40831979 40839758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g02103 56 813 Acyl Lipid Metabolism Gene Families AT4G19380 58.762 0.0 852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02103 K17756 - gmx:100778575 1388.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02103 3 40831979 40839758 Lapu3g02103 3 40831979 40839758 ECH
Lapu3g02103 3 40831979 40839758 Lapu3g02103 3 40831979 40839758 PCT