Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g02047 ATGGCGGAGAAGACATTCGGCGGCGTGATAGGGTACGCGCTGGCGCCGAAGAAGCAGAACAGCTTCATCCGCGACTCATTGGTGAGTCTAGCGAAATCTCGAGGGATCGAACTCGTGCGCGTGGACTCGGACAAGCCCCTTGCGGATCAGGGCCCCTTCGATTGCGTCCTCCACAAGCTCTACGGCGACGATTGGAAGCGCCAGCTCCAGGAATTCCAGACTCGCTTCCCAAATGCGGTTATCCTTGACGCGCCCGAAGCGATCGAGCGCCTCCACAACCGAATCTCGATGCTGCAGGTCGTGTCGGAGCTCCGAATCCAGAACCGAAACGAGACCTTCGGGATCCCGAAGCAGATTGTGATATACGACAAGGCCACGCTAATGGACCCCCAGGCCTGGGAGAGCCTTAAGTTTCCGGTGATTGCGAAGCCTCTTGTGGCCGACGGCAGCGCCAAGTCGCACAAGATGGCGCTTGTGTTCACGTGCGACGCGCTCGACAAGCTGAAGCCCCCGATCGTGCTGCAGGAGTTCGTCAACCACGGGGGCGTGATCTTCAAGGTTTACGTGGTGGGCGAGCACGTGCGGTGCGTGAAGCGCAAGTCCCTCCCAGACGTGACGGAGGAGAAGACGGTGGGCGATTCGGAGGACCTTCTGTCGTTTTCGCAGGTCTCCAACGTGGCCAACCACGACGCTGAAAACGACAGCGATGGCTATTACAAGCTGATGCATTTGGACGACACCGAGATGCCCCCAAATGCCTTCGTCGTCGACATCGCCAGGGGTCTCAGGCGCGCCCTCAAGTTGAACCTCTTCAATTTCGACGTCATAAGGGACGCTCGATACGGGAACCGCTACCTCATCATCGATATCAACTATTTCCCTGGCTACGCCAAAATGCCTGGGTACGAGGCCGTTTTGACCCAGTTTTTCTGCGATGTCATGTTGAAGAAAGAGCAAGAAGAACAACAGGGGGAGGGTCGCGTTCCCGTTTCGACCAAGGACAATGAGGAATCTTTTCAGGTACCTTTTCAAATACCCTCAATATTTAGGAAAGTTGTATTTTGCGGCTTAAGATACTAA 1080 0.5593 MAEKTFGGVIGYALAPKKQNSFIRDSLVSLAKSRGIELVRVDSDKPLADQGPFDCVLHKLYGDDWKRQLQEFQTRFPNAVILDAPEAIERLHNRISMLQVVSELRIQNRNETFGIPKQIVIYDKATLMDPQAWESLKFPVIAKPLVADGSAKSHKMALVFTCDALDKLKPPIVLQEFVNHGGVIFKVYVVGEHVRCVKRKSLPDVTEEKTVGDSEDLLSFSQVSNVANHDAENDSDGYYKLMHLDDTEMPPNAFVVDIARGLRRALKLNLFNFDVIRDARYGNRYLIIDINYFPGYAKMPGYEAVLTQFFCDVMLKKEQEEQQGEGRVPVSTKDNEESFQVPFQIPSIFRKVVFCGLRY* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g02047 359 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 9 88 IPR041429 -
Lapu3g02047 359 Gene3D - 86 295 - -
Lapu3g02047 359 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 85 297 - -
Lapu3g02047 359 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 9 320 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Lapu3g02047 359 FunFam Inositol-tetrakisphosphate 1-kinase 84 295 - -
Lapu3g02047 359 FunFam Inositol-tetrakisphosphate 1-kinase 118 218 - -
Lapu3g02047 359 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 108 311 IPR040464 -
Lapu3g02047 359 PIRSF ITPK 1 326 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g02047 Lapu-Chr3 39542016 39544232 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g02047 K00913 - gmx:100127430 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g02047 3 39542016 39544232 Lapu3g02047 3 39542016 39544232 ECH