Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01749 ATGGACCCTGTGGAGGTTCTCCTTCCCTGGGTTCCCGAGGATGACCTTCTCCTCAAGAACGCAGTTGAGGCTGGTGCTTCGCTGGAATCGCTGGCAAGAGGAGCCGTTCTGTTCTCGAGGCGGTACTCCTTTAGGGAATTGCAAGACCGGTGGTTGTCTTTGCTCTACGACGGGGATGTTTCCACCAAGGCTGCCCTTGCCATGCGGAATTTGGAGCTGGCCAAGTTAGCTGCTACCGGTGGTGAAGGAGGTGGTAGTGGTGGTGGGGAGAATAGGAAATTTCAAAGCAGTGGTGGTGTTGGGGAAAAAATGAAATTTCAAAGCATTCGAAAGCAGTACTGCACCATGCAGAAAAAACGGCGCCGGCATCGCAGCAGTGTCATGTCTTCCAACAAGGTAAAGAATGGTGTGGTGGACTGTGAGGGAAAAGAGAATGTGGAGGTTGACGGTAATTTAATTAGTGATGTAAATAATAGTGTAGTTGGTTATGAGAATTGTGTGGGGTTAGAGGGGGTAGAGGTAGGGCAATTAAGTGATTTGGTGAGTGATGTACCTCTGTGGAATACGAATGAGGATGTTTGTTTGCCTGATAAGCCTGTTCATGTTAGTGTTGAGGGTAAGAAATGTGGTTCTGAAGGGGGAGTGGATTTGAAAGATAAGTGTGGGAATGATGGGTTGAAATTAGATGATGCTGAATGTCTCTTGAACTTGGCAAATGAGGATGAACTTTGCTTTATGAATGTAGAGGGGAAGGAGGTAATGGCTGTGGGTAAGAATAAGGATAAGTCATGCTATGATAATGCTGATTCCCTTCTCTTGAGTTCTTTCTGTGATGTTACTGAATTGCAGAAGTTGGATACTGAAGCAAAACTTTCTGTGTCTAGTGGGTGTGCCTCTGATGGACTCGGGGTTGTGGCTAATCCATTAGGTGGCAGTTTTGGTGATCAGCATTTCATTTCTGATCCTGGAAACAGTGCTGCAGTGTCAGCTGCACCACAAAGTCCTCACCCTGAACACAGTGAGGGATTTATGATCTGTGTGTTGAATACTGAGCACCCTGATATCCCGTGCAATGTTAATGCAGATTTATCTGTTGTAGTTCCTGAATTAGCATCTCTGAAATCCCAACCAGTTGTTAAAGAGGTGGGTTTTTCAGGATCTGTTATTAGTAATCAAAGAATAAATGAACCAGATGGAAGCCTAAAGAAAGAAGCTGTTCTTTCTCAGTCTTTTGCTGCTTCACAAGTTCAACAAGGATCCATGCCTAATGTGAAATCAAGCTACAAACCTTTTGTTTTTGGACTGAAAAGTGAAAATCCTGGAAGAAACTCTATATCTGCAGTTTCTAGACAGAATAACTATGTTGATGTCAACCTAAGTCATGGAGGATCAGTTCGTCCAACTGTGATGCTTGCCTTAGATGGACATCTGAAACAAGAGGATATTGACGTTAAGGCTGTGGAACATAAAGCTTTATCGAAATTAGAAGCAAAATCATTATCTCTTGATCAGGAAGGAGGTAATATCAATGATGATGATGATGATGAAGATGATAATGATGATGATTATAATGATGATGTACTTCCTAATTTTTCTGATGTTGAGACAATGATTCTTGAAATGGATTTAACTCCAATGGATGAAGATCCAAATGCAAGGAGAGAAGTCTTCAGATATCAACATGAAGTAAGTAGGAAGACCATCATGAGATTGGAGCAAGGTGCTCAGTCCTCTATGGGGAGAGCCATTAGATCTCAGGGTGCACTTGCAGTAGTGTATGGGCGCATTCTGAAGGAATATATTAGAAAAAGCAAGGTTATACTTGGCAGAGCAACAAATGATGTACATGTTGATATTGACTTGGGAAAAGAAGGGGAGGAGGCGGCTACAAAAATATCTAGAAGACAGGCTTTAATAAAGCTCGACTCGGATGGTTCTTTCATAATTAAAAATCTTGGCAAGAGATCTATCTTCTTGAATGGCAGAGAAATTGCTACAGGACAAGCGCGGGGTCTTGGTGCTAGTAGTGTGATCGAGATTAGAGACATTTCACTCCTCTTTGAGACCAATAATAGGTGCGTGAAGAGGTTTTTAGAAAATGTGAATGAAAAGATATGA 2118 0.424 MDPVEVLLPWVPEDDLLLKNAVEAGASLESLARGAVLFSRRYSFRELQDRWLSLLYDGDVSTKAALAMRNLELAKLAATGGEGGGSGGGENRKFQSSGGVGEKMKFQSIRKQYCTMQKKRRRHRSSVMSSNKVKNGVVDCEGKENVEVDGNLISDVNNSVVGYENCVGLEGVEVGQLSDLVSDVPLWNTNEDVCLPDKPVHVSVEGKKCGSEGGVDLKDKCGNDGLKLDDAECLLNLANEDELCFMNVEGKEVMAVGKNKDKSCYDNADSLLLSSFCDVTELQKLDTEAKLSVSSGCASDGLGVVANPLGGSFGDQHFISDPGNSAAVSAAPQSPHPEHSEGFMICVLNTEHPDIPCNVNADLSVVVPELASLKSQPVVKEVGFSGSVISNQRINEPDGSLKKEAVLSQSFAASQVQQGSMPNVKSSYKPFVFGLKSENPGRNSISAVSRQNNYVDVNLSHGGSVRPTVMLALDGHLKQEDIDVKAVEHKALSKLEAKSLSLDQEGGNINDDDDDEDDNDDDYNDDVLPNFSDVETMILEMDLTPMDEDPNARREVFRYQHEVSRKTIMRLEQGAQSSMGRAIRSQGALAVVYGRILKEYIRKSKVILGRATNDVHVDIDLGKEGEEAATKISRRQALIKLDSDGSFIIKNLGKRSIFLNGREIATGQARGLGASSVIEIRDISLLFETNNRCVKRFLENVNEKI* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01749 705 Gene3D - 553 701 - -
Lapu3g01749 705 ProSiteProfiles Forkhead-associated (FHA) domain profile. 606 664 IPR000253 GO:0005515
Lapu3g01749 705 PANTHER MICROSPHERULE PROTEIN 1 9 703 IPR037912 GO:0002151|GO:0031011|GO:0071339
Lapu3g01749 705 SUPERFAMILY SMAD/FHA domain 598 688 IPR008984 GO:0005515
Lapu3g01749 705 SMART FHA_2 605 664 IPR000253 GO:0005515
Lapu3g01749 705 Pfam FHA domain 606 680 IPR000253 GO:0005515
Lapu3g01749 705 Pfam N-terminal region of micro-spherule protein 10 73 IPR025999 -
Lapu3g01749 705 MobiDBLite consensus disorder prediction 507 527 - -
Lapu3g01749 705 MobiDBLite consensus disorder prediction 498 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01749 Lapu-Chr3 28795227 28800296 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01749 - - vra:106769492 1033.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01749 3 28795227 28800296 Lapu3g01749 3 28795227 28800296 ECH