Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01744 ATGGGCTTTTGGAGGTGTGCAATTGCTGAGCTAGTGGATAATGCTGTTGATGAGATTCAAAATGGTGCAACTTTTGTAAAGATTGACAAGTTCGATGTCAAGAAGGATAATTCACCAGCGTTATGTTTCCTAGATGATGGTGGTGGAATGGATCCTAACGCAATTCGAAAATGCATGAGCTTGGGTTATTCATCAAAGAAGTCAAAGACAACAATTGGACAGTATGGCAATGGATTCAAGACTAGTACCATGAGACTGGGTGCTGATGTCATTGTTTTCACTAGGGCAAGGCATTCAGGCCGAGCAACGCAAAGTGTGGGTCTACTATCCTATACCTTTTTGCGGAGAACTGGACAAGATGATGTAGTTGTTCCAATGATAGATTTTGACATATCTGGCCATTGGGCTGAGCCAATTATTTATAGCTCACAGGATGAATGGTCAGCGAACTTGAAAACAATTCTTGATTGGTCTCCATTCACATCAAAGGAGGAGCTCATGCTTCAGTTTGATGATATAGGATCACATGGAACCAAAGTAGTGATATACAATTTGTGGTTGAATGATGAAGGGATATATGAATTGAGTTTTGATGTTGATGCTGAGGATATTATGCTGAGAGATGAGGCCAGCCATGGGGAGAAAAAATTGAACAAGAGAACTGTTCAGCTTCATTCACATATTTCTTATCGCATTCGTTATTCTTTAAGGGCATATGTTTCGATGTTGTACCTTAGAAAATTTTCTAACTTCAAAATCATACTAAGGGGGAAACTTGTGGATCAGTTCAACATTGCAGACGACTTAATACATTCAAAAGTAATTCCATATAGGCCTCAGCTAGCCATTGCATCAAATGAGGCCATTGCAGAGACAAAGACAACCATTGGATTTATAAAGGAGGCTGCTTCTATTAAGGTTACTGGATTTAATGTGTACCACAAAAATCGCCTAATCAAGCCCTTTTGGAAAGTAGTTGCAGATGGTTCGTCAAAAGGAAGTTGTGTTGTTGGAGTTCTTGAAGCCAATTTTATAGAACCAGCTCATGACAAGCAGGATTTTGAGAGATCAGTGTTGTTCATTCGGCTGGAAAACAAGCTGAAACAAATGACAATGGATTACTGGAAAGGCCACTGTCACTTGATTGGATATCAGCCCCTAAATTTCAGATCACAAAATGTGGTAAAAGAAGCCCAGATACGAAAATCAGCTGAACATTCAACTAATACACAGAATGAGTTGCTTGGTGATCAACAGGTTACCGGTGTGGTACCTAGGCATCGAAACACCCTGAGTTTAAATCAAACTATTGTTGGTCTTGATGTGACTGGCATGCAAGATTTAAGTCATGAGCAACTTGGTACAATGGTTGGAACTCCACAGTCTGTATCTGTTGATGAAATCTGTGCAGAAAACATAAAACTTTTTGAGAGGTGTGAGGAGTACAGGCTAAAGGAGACAGAACTGAAAAAGACGGTTGTTGTCTTGGAGGAGGAATATAAACAAATCCAGAAGAAATGTGCCGTTCTTGCTTCACTCTTGGAGACTAAGAGGAAGGAGAAGTATCTTAAGGGATGA 1578 0.3992 MGFWRCAIAELVDNAVDEIQNGATFVKIDKFDVKKDNSPALCFLDDGGGMDPNAIRKCMSLGYSSKKSKTTIGQYGNGFKTSTMRLGADVIVFTRARHSGRATQSVGLLSYTFLRRTGQDDVVVPMIDFDISGHWAEPIIYSSQDEWSANLKTILDWSPFTSKEELMLQFDDIGSHGTKVVIYNLWLNDEGIYELSFDVDAEDIMLRDEASHGEKKLNKRTVQLHSHISYRIRYSLRAYVSMLYLRKFSNFKIILRGKLVDQFNIADDLIHSKVIPYRPQLAIASNEAIAETKTTIGFIKEAASIKVTGFNVYHKNRLIKPFWKVVADGSSKGSCVVGVLEANFIEPAHDKQDFERSVLFIRLENKLKQMTMDYWKGHCHLIGYQPLNFRSQNVVKEAQIRKSAEHSTNTQNELLGDQQVTGVVPRHRNTLSLNQTIVGLDVTGMQDLSHEQLGTMVGTPQSVSVDEICAENIKLFERCEEYRLKETELKKTVVVLEEEYKQIQKKCAVLASLLETKRKEKYLKG* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01744 525 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 7 103 - -
Lapu3g01744 525 Gene3D - 3 194 IPR036890 -
Lapu3g01744 525 Pfam Morc6 ribosomal protein S5 domain 2-like 234 375 IPR041006 -
Lapu3g01744 525 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 7 521 IPR045261 GO:0016887
Lapu3g01744 525 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 6 188 IPR036890 -
Lapu3g01744 525 Coils Coil 479 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01744 Lapu-Chr3 28331879 28374949 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01744 - - gmx:100781431 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01744 3 28331879 28374949 Lapu3g01744 3 28331879 28374949 ECH