Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01720 ATGGGCGGCGATGACGGCGAACGTGGATGGCGTTACACATGGGAAGCACAGTCCCATGTCCCAACGCTGCGTTTAATGGTATTCCCCAATGATAAAACCCTAAACCCCTCACTCCAATGCCACGACCTCGCCATCAATCTTCACTCCTCAGACTCTTTCCTCACTCTCACAACCTCCTCCCTCTCCCTTAGGGTTCCGCTTCCTGCCGTCTTGCTCGACGCCGACTCTCCTGTCACATTTCGCCCACTTTCCGACCACATCGAGGTCAAGCTCCTCCTCCTCCTCCCCGTCGACCATCCCATCCTCTCCTCCCTTCACCCTTCACCAACTCCGCTGCCGGACCCTCTCATATCAGAATCTGATGTGAAAAGATTGTCTTCTGCAGGGGAAGTTGACTTTTACTGCAGAAATTGCACCTTCAAGTTGACCAAAATTCCTCTCAGGACTTTCGTTGAAATGCCGTCCGTGAATTGGAGAGAAGTGGCTGACAACTGGTTTGGGACTTGTTGTTGCTCTTTTGGAGGAATAAGTGAGAAGATGGTGATGAGGTATGTGAGTTCGTATACGTGCATGCCAGGGGTCAGTCTATTAACTTCTGCTTCCGTCACTCTTTGCAAGGATGATCTTGTGGAATATAATTTTCCTGAACGGTGTGGAAAGCCAGAGTATACTTCTGTAGCCGAAAACCCCATAGATGATGGTGTTGGCAAAGGTGCAAGAAACTGTGAATTGAATGATGAAAGGACTTCAACTTGCAGTGATGATGGAGGAGTGACCCTTGCTTTTGATAGCAATTATAGGTTTGTACACCCTGAGGATGAGAAGCTTTCTATGAATTTGAGATGTGAAGTTGCAAAGAGTAAACCGGATTGTGGTCATTTATCTGATTCCCACCCAGATTTAAATGGCACCCAAGATGTCACTGAAACTGGTAGTTGTTGTGCTCATATGACAAACAATCTTGGGGATGAAGACAGTGAGCATCATTCATGTGGAACTGCTAGAAGGGAAGAGATCCCAACGGAGACCCTAAATATTATGGGAAATCAAAAGTCCTTACTCGACGGTTTTCTTGAAGATATTTTCATGGCTAGATTGTCAAATCTAACAAAGGATATTGATTGGCGTGAGTTTACATGCCCTCAATGCACCGCTATCATAGGAGCCTACCCATGTTGTGAGGGGCATACACCTGTAGATGGAGGAGTACGGTTGTTCAAATGTTATATTTCAACCAGTTTGCCGGTTGGAGGATCTGAGGACATGTTCAGCGAATATACAATGGGCAAAATGTTTGCAAATCGGTTGATGGAGTGTGCAAATGACGAATCGTCATTTCGGTTTGTTATTAGAGATCTAACAACCAAAGCCCCTGTTCTGCAAATCATTCTTTTAAATCCAGATACTTGGTCTTGTTCTGGTAATTGTTCTGGTACAGCGGACAAAGACCCAGTTGATAAATTAAAGTTGCAGCCTATCATCAAAGTGCTTTATTCTGACTGCCACAATGCAACAGAATCTCAATCAAGGATTGTCGAGGAATGGGCAACAAAGAATTCGGCTGAAAACATTTTCATGTTGACTCGTCAGACACAAGAATTGGTGGGATTGTTCATATCAGCAAAAGATTTATATCCATCTTCATGTGCTTCCCTTCAAGGTTTAATTTTGTCTTATTTGCATTTGTAG 1689 0.4452 MGGDDGERGWRYTWEAQSHVPTLRLMVFPNDKTLNPSLQCHDLAINLHSSDSFLTLTTSSLSLRVPLPAVLLDADSPVTFRPLSDHIEVKLLLLLPVDHPILSSLHPSPTPLPDPLISESDVKRLSSAGEVDFYCRNCTFKLTKIPLRTFVEMPSVNWREVADNWFGTCCCSFGGISEKMVMRYVSSYTCMPGVSLLTSASVTLCKDDLVEYNFPERCGKPEYTSVAENPIDDGVGKGARNCELNDERTSTCSDDGGVTLAFDSNYRFVHPEDEKLSMNLRCEVAKSKPDCGHLSDSHPDLNGTQDVTETGSCCAHMTNNLGDEDSEHHSCGTARREEIPTETLNIMGNQKSLLDGFLEDIFMARLSNLTKDIDWREFTCPQCTAIIGAYPCCEGHTPVDGGVRLFKCYISTSLPVGGSEDMFSEYTMGKMFANRLMECANDESSFRFVIRDLTTKAPVLQIILLNPDTWSCSGNCSGTADKDPVDKLKLQPIIKVLYSDCHNATESQSRIVEEWATKNSAENIFMLTRQTQELVGLFISAKDLYPSSCASLQGLILSYLHL* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01720 562 Pfam HECT-like Ubiquitin-conjugating enzyme (E2)-binding 39 551 IPR019193 -
Lapu3g01720 562 PANTHER E3 UBIQUITIN-PROTEIN LIGASE E3D FAMILY MEMBER 6 560 IPR019193 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01720 - - vun:114179863 976.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01720 3 27089052 27093358 Lapu3g01720 3 27089052 27093358 ECH