Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01668 ATGGAAGTAGCACAGGTACTGCGCATGAATGGAGGCGTTGGAAACACAAGCTATGCAAACAACTCCTCTGTTCAGCAAAAGGTAATTTGTTTGACAAAGTCAGTAAGAGAGGAAGCCATAACAAGCCTTTATCGCAGCACACTTCCTGAAAGTTTGGCAATTGCAGATTTGGGTTGCTCTTCTGGACCAAACACTTTGTTTGTTGTGTCTGAACTCATCAAGACCGTGGAGAAGCTTTGCCGACAGCTGAACCATAAATCTCCAGAATACATGGTGTTTCTGAACGATCTCCCTGGGAATGACTTCAACAACATCTTTAGGTCCCTTGACACCTTCAAACAGAAATTGTGTGATGAAATGGAAACTGGGATTGGTCCATGCTACTTCTCTGGGGTTCCCGGTTCTTTCTATGGCAGGGTTTTCCCCAATCGAAGTTTGCATTTTGTGCATTCCTCTTACAGCCTTCAATGGCTATCCAAGGTTCCTGAGGGTGTAGACAACAACAAGGGAAATATTTACTTAAGCAGAACAAGCCCATCAAATGTTGTCACTGCTTACTATGACCAATTTCAGAGAGATTTCTGTCTTTTTCTCAAGTGTCGAGCAGAGGAACTAGTTGAAGGAGGTCGTATGGTTCTGACATTTTTGGGAAGAAGAAGTGATGATCCATGTAGCAAGGATGGTTGCTACATTTGGGAGCTTATGGCTTCGGCTCTTAATGATATGGTTTTGCAGGGAAGGGTAAAGGAAGAGCAATTAGATAGTTTTAACATCCCTCAATACACTCCATCCCCTTCCGAAGTGAAATTTGAAGTTGATAAAGAAGGGTCATTTTCTGTTAATAATCTAAAAGTGTCTGAAGTGAACTGGAACGCTTTTGATGATTGGAATGCTCTTGAGTTTGAATCTGAAAGGTCTGAATCAGTTGGTGATGGTGGATACAATGTAGCACAGTGCATGAGAGCTGTGGCAGAACCTATGCTGGTTAGCCACTTTGGTGAAGATATCATTGATGAGGTTTTCAGCCGCTACCAACAAATCTTGGCTGATCGTATGTCCAAGGAGAAAACTAAGTTCATCAATGTTACCATACTATTGACCAGAAAGACATAA 1113 0.4214 MEVAQVLRMNGGVGNTSYANNSSVQQKVICLTKSVREEAITSLYRSTLPESLAIADLGCSSGPNTLFVVSELIKTVEKLCRQLNHKSPEYMVFLNDLPGNDFNNIFRSLDTFKQKLCDEMETGIGPCYFSGVPGSFYGRVFPNRSLHFVHSSYSLQWLSKVPEGVDNNKGNIYLSRTSPSNVVTAYYDQFQRDFCLFLKCRAEELVEGGRMVLTFLGRRSDDPCSKDGCYIWELMASALNDMVLQGRVKEEQLDSFNIPQYTPSPSEVKFEVDKEGSFSVNNLKVSEVNWNAFDDWNALEFESERSESVGDGGYNVAQCMRAVAEPMLVSHFGEDIIDEVFSRYQQILADRMSKEKTKFINVTILLTRKT* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01668 370 Gene3D Vaccinia Virus protein VP39 21 357 IPR029063 -
Lapu3g01668 370 FunFam Jasmonate O-methyltransferase, putative 31 162 - -
Lapu3g01668 370 Pfam SAM dependent carboxyl methyltransferase 38 368 IPR005299 GO:0008168
Lapu3g01668 370 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 8 357 IPR005299 GO:0008168
Lapu3g01668 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 369 IPR029063 -
Lapu3g01668 370 Gene3D - 6 355 IPR042086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01668 Lapu-Chr3 24611433 24615852 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01668 K21483 - gmx:100170650 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01668 3 24611433 24615852 Lapu3g01668 3 24611433 24615852 ECH