Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01639 ATGAGATATAGGATTTCCTATTTTATGGACGAGATCTGGGAGAGGGCTGTGGAGACAGCGTTAGACGGCGAGAAGGACCATGCGTCCGCCCGGACGCTAACCCTAGACGGCGCCGTTAAGTGCGTGCAAGGACGGTTGCCGCCTCCTAGCCTTCTTGAAAGGTTCCAGAACCTTCAGCACCTTTCCATCGCAAACGTTGGTGTTTCAACGCTCGAGCAGTTTCCGCGGCTCCAGAATCTGCAAAAGCTCAACCTCTCCGACAACCGGATCGCGGGCGGGTTGGAGTTTCTTGTCCAGGCTGGCCTTGATTCGCTGCGTGACCTTGATTTGTCGAACAATCGGATTCAGTACATTGAGGATCTCGCGCCGCTGGCGCAGGTGAAGCTGGTTTCGCTGGATCTGTATGAGTGTCCCGTGACGCGTGTGAAGGATTATCGATCTAGGGTTTTTGGGTTGATTAAGTCGCTCAAGTACTTGGACAAGATGGATGCGGAGGAGAACGAGAGGCCTGAAAGTGATGATGAGGAAGAGGAGGAAGAGGATGAGGAGGAGGAGGATGACCCTGGGAGTGGCGAGATTGATGGAGAGGAAGATCGGCCGCTTGGGATTAACAATGGACACAGCGAGGGTGTCGATGGTGTTGTTGATGCTGATGAGGAAGAAGAGAGTGACGCGGATGAGGAAGAGACTGAGACGTCGAGGCGGGTTATTAATGGCGAGAATCACCGGGAAAATGGGTTCCGTGTTGTGCCGGTAGAGGGGGATGACGTGGAGGAGGACGATGAGGAGGATGATTCTGGTGAGGAGATTGATGAGGAGGAGGGGGATGATGATGATGTTGTGGAGGTTCATGAGATTGAGGATAGCGATGATGAGGATGGAGTGGAGTATGATGAGGATGATGACGATGATGAGGACGATGAGGAGGAGGTGGATAATGATGATGGTGATTTTGCGGAGCCGGAGAGTACTGGGAGGTTAACGAGTACGGAGGGGGAGATTGATGGGCATGAGCAGGGGGAGGAGGATGGAGATGAGGATGATAATGGTGAGACTGGGGAAGATGAGATGGGGGTTGAAGATGATGGCGAGTTTGAAGATGATGAAGAAGAAGAAGACTATGGTGGTGGGTACCTTGTTCAGCCAGTTGGACAGTCAGATGCCCTCAATGCTGGAGTTGTTGCTGATGTGGATGGTGGAAATGATGATGGTGAAGAGGAGGATGAAGTTGATGATGACGATGATGATGTTCAGGTGTTACCTCCTGATTCTTCACACCTCAAGAGGAAGAGGAATGATGAAGAAGATGATGATGAGGAGAGTGAAGATGATGAAGATGTGGTAGCATTCACGAAGTCATCGAAGAAGCATCATTGA 1377 0.5134 MRYRISYFMDEIWERAVETALDGEKDHASARTLTLDGAVKCVQGRLPPPSLLERFQNLQHLSIANVGVSTLEQFPRLQNLQKLNLSDNRIAGGLEFLVQAGLDSLRDLDLSNNRIQYIEDLAPLAQVKLVSLDLYECPVTRVKDYRSRVFGLIKSLKYLDKMDAEENERPESDDEEEEEEDEEEEDDPGSGEIDGEEDRPLGINNGHSEGVDGVVDADEEEESDADEEETETSRRVINGENHRENGFRVVPVEGDDVEEDDEEDDSGEEIDEEEGDDDDVVEVHEIEDSDDEDGVEYDEDDDDDEDDEEEVDNDDGDFAEPESTGRLTSTEGEIDGHEQGEEDGDEDDNGETGEDEMGVEDDGEFEDDEEEEDYGGGYLVQPVGQSDALNAGVVADVDGGNDDGEEEDEVDDDDDDVQVLPPDSSHLKRKRNDEEDDDEESEDDEDVVAFTKSSKKHH* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01639 458 MobiDBLite consensus disorder prediction 419 435 - -
Lapu3g01639 458 Coils Coil 162 182 - -
Lapu3g01639 458 ProSiteProfiles Leucine-rich repeat profile. 79 98 IPR001611 GO:0005515
Lapu3g01639 458 MobiDBLite consensus disorder prediction 399 418 - -
Lapu3g01639 458 MobiDBLite consensus disorder prediction 336 375 - -
Lapu3g01639 458 MobiDBLite consensus disorder prediction 214 228 - -
Lapu3g01639 458 MobiDBLite consensus disorder prediction 163 458 - -
Lapu3g01639 458 Gene3D Ribonuclease Inhibitor 10 175 IPR032675 -
Lapu3g01639 458 SMART LRR_sd22_2 77 96 - -
Lapu3g01639 458 SMART LRR_sd22_2 102 123 - -
Lapu3g01639 458 SUPERFAMILY L domain-like 48 164 - -
Lapu3g01639 458 MobiDBLite consensus disorder prediction 254 318 - -
Lapu3g01639 458 PANTHER ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 18 441 IPR045081 -
Lapu3g01639 458 MobiDBLite consensus disorder prediction 229 253 - -
Lapu3g01639 458 Pfam Leucine-rich repeat 64 174 - -
Lapu3g01639 458 ProSiteProfiles Leucine-rich repeat profile. 104 125 IPR001611 GO:0005515
Lapu3g01639 458 FunFam acidic leucine-rich nuclear phosphoprotein 32-related protein-like 13 175 - -
Lapu3g01639 458 MobiDBLite consensus disorder prediction 167 193 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01639 - - gmx:100809629 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01639 3 21249301 21253528 Lapu3g01639 3 21249301 21253528 ECH