Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01622 ATGCCGAAGGCGCCACCGCCCGTAATCTACTATCTCTCGGAGCACCCCTCTATCGTGGGCTTCCGGTGGAGCCATGCCCAATCATGGGGCGCCACCTGGTCCTTCCTCTTCTCCTCCATCGCCTCCTACCTCCTCCTCTCCCTCTTCCTCCACCTCTCGCTTACTCTTTTCCGCCGCCACCGTCCCATCCCCATCGGCCCCCTCCCGGCACTTCACAGCCTCTCCATGTCGCTCACCTCCGTCACCATCTTCGCCGGAATCCTAGTCTCGGCCGCCGCCGAGATACGCGATACGCGGTGGTTCTGGCGGCGATCTAAAACTCCCTTGGAGTGGCTCCTCTGCTTCCCGCTCGGAACCCGCCCATCCGGCCGCGTCTTCTTCTGGTCCTACGTCTACTACCTCTCCTGGTTCCTCCACATGTTCCGAACCCCTCTCAACATCCTACGACGGCGCAGGTTGTCGTTTTTCCACCTCCTCAACGACTCCATCTCCGCTCTCGCTTCCTTCCTCTGGCTGGAGTTCTCCCAGTCCTTTCAGGTCCTGGCCATCCTCTTCGCCACCCTGGTCTACGCCCTCGTTTACGCCTACAGGTTCTGGACCGCCATAGGCCTGCGCGGCGCGTGCTTCCCCTTCGTCCTCAACTGCCAGATCGCCCTCCTCGCTTGCAATGTGGCGTGCCACGTCGGCGTGTTCTTCCTCCACTTCTTCCTCAAAGGCGGCTGCAACGGCATTGGCGCGTGGCTCTTCAACTGCGTCCTCAACGTCGCTCTTCTCATGCTCTTTCTCAACTTCTACGTCAGGATCTACGTTGGAAAAAGGAGAATGCTTAGGGGTGTTACTCCGGCGCTTTCGTAA 855 0.6012 MPKAPPPVIYYLSEHPSIVGFRWSHAQSWGATWSFLFSSIASYLLLSLFLHLSLTLFRRHRPIPIGPLPALHSLSMSLTSVTIFAGILVSAAAEIRDTRWFWRRSKTPLEWLLCFPLGTRPSGRVFFWSYVYYLSWFLHMFRTPLNILRRRRLSFFHLLNDSISALASFLWLEFSQSFQVLAILFATLVYALVYAYRFWTAIGLRGACFPFVLNCQIALLACNVACHVGVFFLHFFLKGGCNGIGAWLFNCVLNVALLMLFLNFYVRIYVGKRRMLRGVTPALS* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01622 284 PANTHER FATTY ACID ACYL TRANSFERASE-RELATED 12 272 IPR002076 GO:0009922|GO:0016020
Lapu3g01622 284 Pfam GNS1/SUR4 family 32 273 IPR002076 GO:0009922|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01622 Lapu-Chr3 20581914 20583128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01622 10 267 Acyl Lipid Metabolism Gene Families AT1G75000 61.597 1.50e-114 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01622 - - pvu:PHAVU_003G251300g 529.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01622 3 20581914 20583128 Lapu3g01622 3 20581914 20583128 ECH
Lapu3g01622 3 20581914 20583128 Lapu2g00634 2 5549467 5550832 ECH
Lapu2g00634 2 5549467 5550832 Lapu3g01622 3 20581914 20583128 PCT