Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01613 ATGGCAGAAATTAGGCTTACCAGGATGGAGCAAGGCCAAACCAAGATTAAAAATGTTCCAATAGCTGTGACCCCAGAAGGGTTTTGGTGCTGCCCTTCTCCTGTGGTGTTTCAGAAAAGCCTAAAGACTCAGAATCCTCTCAATAAGCCCAAACCCTCTTCACTCCCACCAAAAACCAGTGTTCAGAAAAAGCCTGTGTCTATGCCAGTGTATGAGAGAAGAACTGCTACAGCTGCCCCTTCAAAATTGGTTCTTTCTGATGATCAGCAATGTGCCACTGCTCCAGAAAGACCTCCTCCACCTACTTCATCTGTGGCTGCTGCGGAGAGGGGACCCAGGCCAAAGATTGAATCTTTGCCAAAGAAGGTTGCTATTGAGTTTGGCGAACCTGGAACTTGTGATATGAAAGTGATTTTGCTAGGGAAGCAGGGATTTTGTGTCAAGTTAAGTGTGCACAGGAATGTTCTGAGTGAAAAGAGTAGCTTCTTCTCTGAAAAGATATCTGAACAATCGGGGTTGTCTTGTCTCCAAATCGGTGATTGCGAGGATGTTGAGATATATGTTGAAACTGTTGGTCTTATGTACTGTAAGGAGATGAAGCAGCGGCTAATGAAGCAAAGTGTTTCTCGAATTCTTCGAATACTTAAGGTAGCAGAATTCCTTGGCTTCAGCTCATGCATCCAATCATGTTTGGAGTTCTTGGAAGCAGTCCCTTGGGTTGGAGAAGAAGAGGAAGAAAAGGTGGTGTCAACTGTGCTACAACTCCAAGCAGAAGGAATTGGAGTCAACCCTGTGCTGAAACGAGTTTCATCTGACATTTCGAATGTCCCAAAAGACACTCTTTCCCAAATCATTGACCTTGTTCTGAAAAGCAACGAAGAAAGAGGCCGCCGAGAGATGAAATCCATTGTTCTAAAGCTCCTCAGGGAGAACAACAGTCTTCCAAGTTATGCACGCACAACCGACATATGTAATGACACCATTTACAGATCATGCAGAACCTGCTTGGACGCATTACTGGCACTGTTCAAGCAGGCTGCAGAACGGAGCGAAGACAGGGAACCTCTAGCAAAGTGCATAGCTCTTGAAGCTGACAACTTAACGTGGTTGCTTGAGATTTTAGTTGACAAACAAGCTGCTGATGAGTTTGCACTGATGTGGGCAAACCAACAGGAACTGGCTGTGTTACATGCAAAGCTGCCAACCGTGTCACGCTACCATGTTAGCTGCCTTTCTGGGAGATTGTATGTTGGCATTGGGAGAGGGGAGTTGCTGCCATCAAAGGACACACGCCGGTTGTTGTTACAGACATGGCTGCAGCCTCTGATGAACGACTACAACTGGCTGCAGCATGGATGTAGGTCATTTGATGGGAAACTTGTGGAAGAAGGAATTGGGAGGACTATTCTCACCTTGCCTCTGGAGGATCAACAGAGCATTTTGCTTTCATGGTTGGGGAGTTTCTTGAAAACTGGTGATAGCTGTCCAAATCTTCAAAGAGCCTTTGAGGTGTGGTGGAGGAGAACTTTCATTAGGCCTTATGTGGAGAACCTAGGTAATGTTGCTGTGTCAGATAGTTCAATGTTGCCGAAGAAACATGAGTGA 1605 0.4573 MAEIRLTRMEQGQTKIKNVPIAVTPEGFWCCPSPVVFQKSLKTQNPLNKPKPSSLPPKTSVQKKPVSMPVYERRTATAAPSKLVLSDDQQCATAPERPPPPTSSVAAAERGPRPKIESLPKKVAIEFGEPGTCDMKVILLGKQGFCVKLSVHRNVLSEKSSFFSEKISEQSGLSCLQIGDCEDVEIYVETVGLMYCKEMKQRLMKQSVSRILRILKVAEFLGFSSCIQSCLEFLEAVPWVGEEEEEKVVSTVLQLQAEGIGVNPVLKRVSSDISNVPKDTLSQIIDLVLKSNEERGRREMKSIVLKLLRENNSLPSYARTTDICNDTIYRSCRTCLDALLALFKQAAERSEDREPLAKCIALEADNLTWLLEILVDKQAADEFALMWANQQELAVLHAKLPTVSRYHVSCLSGRLYVGIGRGELLPSKDTRRLLLQTWLQPLMNDYNWLQHGCRSFDGKLVEEGIGRTILTLPLEDQQSILLSWLGSFLKTGDSCPNLQRAFEVWWRRTFIRPYVENLGNVAVSDSSMLPKKHE* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01613 534 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 123 517 IPR038920 -
Lapu3g01613 534 MobiDBLite consensus disorder prediction 43 61 - -
Lapu3g01613 534 Gene3D Potassium Channel Kv1.1; Chain A 127 258 IPR011333 -
Lapu3g01613 534 MobiDBLite consensus disorder prediction 43 113 - -
Lapu3g01613 534 SUPERFAMILY POZ domain 132 234 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01613 Lapu-Chr3 20295851 20300884 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01613 - - pvu:PHAVU_003G250400g 953.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01613 3 20295851 20300884 Lapu3g01613 3 20295851 20300884 ECH
Lapu2g00620 2 5393859 5398356 Lapu3g01613 3 20295851 20300884 PCT