Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01611 ATGGGGCATGAAGGGTTGATTCCAAGGCACAAGCGTTCAAAGAGCTTTCCTGATAAAAAAGCAATGGAGGATGATAGTGCAGACAACCACCTTGAGACCTCAGATCGAACAAAGCTGGATACAGGTTACCTCATGGAATGCGGTAGAACTAGGAAAAAACAAACCCCCACAAATGATGTTCAACTTTTACTGAAGCAAGAGATTTTACAATTAGAGAAAAGGCTACAAGATCAATTTGAGGTCAGATGCACGTTAGAAAAGGCACTTGGATACAGACCTACATCTCTTGTTACATCAAATGACATGATACTGCCCAAGCCAACGTCCAAATTGATTAAAGAGATTGCGGTGTTAGAGTTAGAAGTTGTGTATTTGGAACAATATCTTCTCTCCTTGTATCGTAAAGCATTTGATGAGCAATTGCCCTCAGTAGTTCCATTCACCAAGGGGGAAAAAGTAAACTCTCCTCCAACAACACCCAGAGCAAGATTCGTTGAGGTATCTAAGCCTGAGCTCTTAACCAAAAGAGGAAGCTCTGCAGTACAATCAATTAATCATGAGCTTGATTCTGCGCAAAAGGAATATAGTGTATATGAACCTCAGACTTTAGGGAAAGAATACAATGTACATCAACCAGAAGGAAAACAGTTAGACTCAGGTGTATATCGTTGCCACTCCTCATTATCTCAGTGTACAGCATTTACAACAAGAGTATCGCCTCCTGCAGCAGATGAATTAACTGAATCTCTGCGTGCTTGTCATTCCCAACCACTGTCCATGATGGAGTATGCCCAGAATGTTGATGCTTCATCGAGAATAATCAGTCTGGCGGAACATCTTGGCACTCGCATATCTGATCATATTCCAAATACACCCAATAGGCTTTCTGAGGATATGGTCAAATGCATATCAGCTATATATTGCAAACTCGCAGATCCTTCTACCACAAATCCTGGTCTTTCATCTCCCAGTTCATCCTTGTCTTCAACTAGTGGCTTTTCTATTGGAGATCAGGGAGATATGTGGAGTCCAGGGTTCAGGAATAATTCCTCCTTTGATGTGCGGTTAGACAATCCTTTCCATGTGGAAGGACTCAAGGAGTTTAGTGGGCCATACAGCACTATGGTTGAAATATCATGGATTTACAGAGAGAATCAGAAATTGGGTGATACAGAGCAGTTGCTCAAGAATTTCAGATCACTTATTTGTCAATTAGAAGATGTAGATCCTGGGAAGTTAAAACATGAGGAGAGATTAGCTTTCTGGATCAACATACACAATGCTTTGGTGATGCATGCATTTTTGGCTTATGGAATTCCACAAAACAACGTGAAAAGAGTCCTGCTTCTGTTGAAGGCTGCATATAATGTTGGTGGTCATACAGTGAGTGCAGACACAATACAGACCACTATACTCGGGTGCCCGATGCCTCGCCCAGGACAGTGGCTACGCTTGTTCTTTTCTCCGAGGACAAAATTCAAAGCTGGAGATGGACGACAGGCATTTGGAATTGAGCATCCTGAGCCTCTTCTACACTTTGCACTCTGTTCAGGAAACCATTCTGATCCAGCGGTACGTGTATATACACCCAAGAGAGTGCTTCAAGAACTAGAAGCTGCAAAGGAAGAATACATTCGAGCCACCTTTGGGGTACGTAAGGACAAGAAAATACTCTTACCTAAGCTTGTGGAGTCATTTTGTAAAGACTCGGGTTTATGCTCTGCTGGTACCCTGGAGATGATCCAAAAGTCTCTACCTGAATCTCTAAGAAAGAGTGTTAAAAAATATGACCTTGCAAAATCTAAGAAGAGCATAGAATGGACTGCACACAACTTTAATTTTCGATATCTCATACCCAAGGAAATGGTAAAATAA 1875 0.4176 MGHEGLIPRHKRSKSFPDKKAMEDDSADNHLETSDRTKLDTGYLMECGRTRKKQTPTNDVQLLLKQEILQLEKRLQDQFEVRCTLEKALGYRPTSLVTSNDMILPKPTSKLIKEIAVLELEVVYLEQYLLSLYRKAFDEQLPSVVPFTKGEKVNSPPTTPRARFVEVSKPELLTKRGSSAVQSINHELDSAQKEYSVYEPQTLGKEYNVHQPEGKQLDSGVYRCHSSLSQCTAFTTRVSPPAADELTESLRACHSQPLSMMEYAQNVDASSRIISLAEHLGTRISDHIPNTPNRLSEDMVKCISAIYCKLADPSTTNPGLSSPSSSLSSTSGFSIGDQGDMWSPGFRNNSSFDVRLDNPFHVEGLKEFSGPYSTMVEISWIYRENQKLGDTEQLLKNFRSLICQLEDVDPGKLKHEERLAFWINIHNALVMHAFLAYGIPQNNVKRVLLLLKAAYNVGGHTVSADTIQTTILGCPMPRPGQWLRLFFSPRTKFKAGDGRQAFGIEHPEPLLHFALCSGNHSDPAVRVYTPKRVLQELEAAKEEYIRATFGVRKDKKILLPKLVESFCKDSGLCSAGTLEMIQKSLPESLRKSVKKYDLAKSKKSIEWTAHNFNFRYLIPKEMVK* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01611 624 MobiDBLite consensus disorder prediction 1 34 - -
Lapu3g01611 624 Pfam Leucine-zipper of ternary complex factor MIP1 58 139 IPR025757 -
Lapu3g01611 624 Pfam Protein of unknown function, DUF547 412 545 IPR006869 -
Lapu3g01611 624 PANTHER UNCHARACTERIZED 34 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01611 Lapu-Chr3 20233201 20238783 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01611 - - gmx:100816025 1068.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01611 3 20233201 20238783 Lapu3g01611 3 20233201 20238783 ECH
Lapu2g00618 2 5359261 5364314 Lapu3g01611 3 20233201 20238783 PCT