Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01609 ATGGGAAATTGCGTTTGTAGCGAAACCACGCAGGTCGCCACGGCCAAGGTCGTCGTTCATGATGGCAGGATGGAGGAGTTCTCATACCCTGTCAAGGTCTCCTATCTCTTGCAACTCTACCCCGCGTGTTTCATATGCGATTCCGACGAGATGGCCTTTGACGACGTCGTAACACCGGTTCACCACGACCACGAGTTGAAACCTGGCCAGCTCTATTTCGCGCTCCCGCTTAGCCGCCTCAAGCGCCACCTCACGCCGCACGAAATGGCCGCGTTAGCCGTTACCGCCAGCTCTGCTCTCTCCAAGACCGCCGGCCACAAATGTGGCTCTCGCTGCCAGCAGATTGTGTTTCTCCCCGCCGAGGGGAATGCCAAGCCTGGCCGCAGAGTGGCGCCGGACAGTCATGGAGCCGCCCCTGCGCTTGATAACCGTGTGGCGAGAAAAGGAATGAATAGAAGTGGCGGTGTCAGGGGCAGGGGGAAGTTCACCGCGACGTTGAGTTCGATACCGGAGCAGGGGCTAAGAGCAGATTGCCATGGCAATGGTTGA 549 0.5865 MGNCVCSETTQVATAKVVVHDGRMEEFSYPVKVSYLLQLYPACFICDSDEMAFDDVVTPVHHDHELKPGQLYFALPLSRLKRHLTPHEMAALAVTASSALSKTAGHKCGSRCQQIVFLPAEGNAKPGRRVAPDSHGAAPALDNRVARKGMNRSGGVRGRGKFTATLSSIPEQGLRADCHGNG* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01609 182 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 136 - -
Lapu3g01609 182 Pfam PADRE domain 1 171 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01609 Lapu-Chr3 20184055 20185469 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01609 - - pvu:PHAVU_003G250000g 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01609 3 20184055 20185469 Lapu3g01609 3 20184055 20185469 ECH
Lapu2g00615 2 5339616 5340366 Lapu3g01609 3 20184055 20185469 PCT