Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01608 ATGTTACGGACATGTTTGGGGTTGAATTACCATGGTAGAATGGAGGAGCTGCCAGGGGCGTTTGGAAGCAGCGCCAGTTTGGCCCTCCGATTGGGTCAAACAGTGTTTTCCACAGCTTCCCTTCTCTTCATGTGTTTGGATGTTGATTTCTACGGTTACACAGCTTTCTGCTATTTGGTAACAGTCATGGGCTTGGTAATTCCCTGGAGCATAACGCTGTTGGTTGTGGATGCATACTCTGTCTTCATAAAATGTTTACCCCTCCAACGAAGACTCGTAATGATAGTCTTTTTGGGAGACATGATTTTGTCATATCTGTCATTAGCTGCAGCATGTTCAACAGCCAGTGTCACAGATCTCCTGCTCGATGCAGATCGATCCTATTGCCCAGCAAAGCTATGCGGTAGATATCAACTATCTGCTGCTATGGCCTTCTTGTCTTGGTTTCTTTCATCAGCATCTTGTCTGTTTAACTTCTGGCTTTTCCCTTCTTTGTAA 498 0.4498 MLRTCLGLNYHGRMEELPGAFGSSASLALRLGQTVFSTASLLFMCLDVDFYGYTAFCYLVTVMGLVIPWSITLLVVDAYSVFIKCLPLQRRLVMIVFLGDMILSYLSLAAACSTASVTDLLLDADRSYCPAKLCGRYQLSAAMAFLSWFLSSASCLFNFWLFPSL* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01608 165 Pfam Casparian strip membrane protein domain 22 150 IPR006702 -
Lapu3g01608 165 PANTHER CASP-LIKE PROTEIN 5B3 14 164 IPR045009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01608 Lapu-Chr3 20134946 20138220 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01608 - - gmx:100791729 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01608 3 20134946 20138220 Lapu3g01608 3 20134946 20138220 ECH