Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01605 ATGGGTAGAATATTACAACAGTATGTGGCTATGAAAAGTGATACCGTAGTTGCTAGTTTAATCGATTCCGATATAAACGAGCTCAAGCTTGCGGTCAAGAAGTTCCTCCACGATGCAACCGCGCTAGGAGGCAAAGCCTTTTTCGGGGCTTCTTTCTTTAAATGGCTCGCTTCCTTTGCTGCCATATATTTACTGATACTGGATAGCACAAACTGGAGGACGAATATACTGACAGCGTTATTAGTGCCTTACATATTCTTCAGCTTTCCTCAGTCGCTGTTCCACTTTTTAAGAGGAGAAGTTGGAAAATGGATTGCATTCATCGCAGTGGTGCTGAGGCTTTTCTTCCCTACACATTTTCCTGATTGGCTGGAAATACCTGGCTCAATGATTCTGATTCTGATAGTGGCCCCCAACATATTTTCTGACAAATTAAGGAATAACTGGATTGGATTGGCAATTGATCTTTTCATTGGTTTATACCTATTACAAGAACATATCAGGGCTTCTGGTGGATTCAGAAATTCTTTCACACAGAAACATGGAATATCAAATACTCTTGGCATTCTCCTCCTCATAGTCTATCCTATCTGTGCATTCATTATCCATTAA 612 0.4052 MGRILQQYVAMKSDTVVASLIDSDINELKLAVKKFLHDATALGGKAFFGASFFKWLASFAAIYLLILDSTNWRTNILTALLVPYIFFSFPQSLFHFLRGEVGKWIAFIAVVLRLFFPTHFPDWLEIPGSMILILIVAPNIFSDKLRNNWIGLAIDLFIGLYLLQEHIRASGGFRNSFTQKHGISNTLGILLLIVYPICAFIIH* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01605 203 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 7 201 IPR008892 GO:0016020
Lapu3g01605 203 Pfam Cold acclimation protein WCOR413 11 192 IPR008892 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01605 Lapu-Chr3 20074562 20075730 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01605 - - gmx:100810337 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01605 3 20074562 20075730 Lapu3g01605 3 20074562 20075730 ECH