Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01588 ATGAGTTCAGAAAACTGTGTAGATATGAAACACTATGTTCTGGTGCATGGGGCTTGTTATGGAGCTTGGCTCTGGTATAAGCTGAAGCCACGTTTGGAATCTGCAGGCCACAGGGTCTCAGTGCTGGACCTTGCAGCTTCTGGCATCAACATGCAGAAGATTGAAGACGTTCATACTTTCTCACAGTATTCTGAGCCTTTGTTGCAGCTATTGGCCTCAATTCCCCCAAATGAGAAGGTAGTTCTCGTAGGTCACAGTCTTGGAGGACTCAACATAGCACTTGCCATGGACAAGTTCCCAGAAAAGGTAGCAGTTGGTGTTTTCGTAACTGCTGTCATTCCAGACACTCAACACCAGCCATCCTATGTCTTGGAAAAGTTAATTGAGACTACCTTGGGAACGAATTGGTTGGACACTGAATTCTCGCAGGGTGGAAACAAAACAACAGTTGTTTTTGGTCCCAAATTCCTGTCCGAAAAACTCTACCAAGCCTCTCCCATTGAGGATATAGAATTGGCCACGACCTTATTAAGACCAGGATCCCTCTTTATCGAAGATTTGTCCCAACAGAAAAACTTCTCCATGCAGGGATATGGGTCAGTTCCTCTTGCTTTTATTGTTTCCACTGAGGACAATGAAATTCCATTGAATTTTCAGCTGTGGATGATTCAAAATGCTGGAATGAATGTTGAGGTTCAAGAGATCGAAGGTGCAGACCATATGCTTATGATTAGCAAGCCACAAGAACTATGTGATTCTCTCCTGCATTTAGCTACTAAATACGCATGA 789 0.4373 MSSENCVDMKHYVLVHGACYGAWLWYKLKPRLESAGHRVSVLDLAASGINMQKIEDVHTFSQYSEPLLQLLASIPPNEKVVLVGHSLGGLNIALAMDKFPEKVAVGVFVTAVIPDTQHQPSYVLEKLIETTLGTNWLDTEFSQGGNKTTVVFGPKFLSEKLYQASPIEDIELATTLLRPGSLFIEDLSQQKNFSMQGYGSVPLAFIVSTEDNEIPLNFQLWMIQNAGMNVEVQEIEGADHMLMISKPQELCDSLLHLATKYA* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01588 262 Pfam Alpha/beta hydrolase family 13 251 IPR000073 -
Lapu3g01588 262 PANTHER METHYLESTERASE FAMILY MEMBER 10 258 IPR045889 -
Lapu3g01588 262 FunFam (S)-hydroxynitrile lyase 7 262 - -
Lapu3g01588 262 SUPERFAMILY alpha/beta-Hydrolases 13 256 IPR029058 -
Lapu3g01588 262 Gene3D alpha/beta hydrolase 8 262 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01588 Lapu-Chr3 19538208 19546796 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01588 11 168 Miscellaneous Gene Families AT5G10300 53.704 2.14e-55 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01588 - - gmx:100807291 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01588 3 19538208 19546796 Lapu3g01588 3 19538208 19546796 ECH
Lapu2g00597 2 5215731 5217315 Lapu3g01588 3 19538208 19546796 PCT