Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01416 ATGGCTACGATGCTTGAGAGTGAAAAAGACCCTTCACAACCACCTTCACGTGGCTTTGTGGACACAGTAGAAGAAATCACCAGAATATATAGGTCACTGCCACCTCGACCTTCCATTGAAGAGGTGGAAGCTGCCACGTCCATTGTGGATACCCTCAACAACGAGGAACAAACCAAACTAAACGAAATCTCAATGCAACAACCTCCTCACGATGTCCCTGAGGACCTCTTCTCTGTCCTGCAGCAACTCAAGAAGACCCTGGTCCTGTTCCACACCCACCAACAGAGGAGAGAGGCTCTTCAACTTCTTGAGCTCGAAAAGATGTTTCAAACCTTCGGTGATCTCATTCAGAGGGCTTCTGAATTGGTTTCTGGAGATACCCAGAAGCAAAACCTCCCCCCTTTACCCGAAGAACTCGTTGTGATCACTGACCAAACCGAAACTTTGGTGAAGGAAGAGGAAGAATCACGGAAGAATGATTTCCAAGTGATACAACCTTCCTTGTCTGCAGGGGATGGAAGCGCTGAGAAATTAAGTCTAATGAAAGTTGCTACTGTTATTGAAAGTTGTGCTGGTAGTGGAGCTACAACTCTTGATCTTAGAGGGAAGTTGGTGGATCAGATGGAATGGTTGCCGGTATCAATTGGGAAATTATCTGATGTCACTGAAATGGACCTATCTGAAAACAGAATCATGGCTCTTCCAACAACCATTGTAGGTCTCAAGGCCTTAACAAAGCTTGATCTTCACTCAAACCAACTTATAAACCTTCCCCATTCATTTGGTGAATTGATAAACCTTGTTGATCTTGACCTCCACGCCAACAGATTGAAATCACTTCCTGCTACTTTCGGAAATTTGACAAACCTCATTGATCTAGACTTGAGCTCAAATGGGTTCACAAATTTACCAGAGACAATTGGGAATTTGAGAAGCTTGAAGAGATTGAATGTTGAGACCAACGAGCTTGAGGAACTGCCTCACACAATTGGAAATTGCTCATCACTATCTGTTCTCAAATTAGATTTCAATCAGCTCAAGGCCCTACCCGAGGCAATTGGGAAGCTTGAATGGTTGGAGACTCTCACTTTGCACTATAATAGAGTTAAGAGGTTGCCTTCAACAGTGGGTAATCTATGTAATTTGAAGGAACTTGACGTTAGCTTTAATGAACTCGAATTTGTACCAGAGAACCTGTGTTTTGCAACTAATTTGAAGAAATTAAACTTGGGAAAGAACTTTGCGGACCTAAGAGCCTTGCCAACATCAATTGGAAATCTTGAAATGCTTGAGGAGTTGGATATAAGTGACAATCAAATAAAATCTTTACCAGAGTCTTTCAGGTTCTTGTCCAAGTTGAGAGTTTTTCGAGCTGATGAGACTCCCCTTGAGGTGCCACCCAGAGAATTGGTTAAATTGGGTGCTCAGGAAGTTGTGCACTATATGGCTGATTTTGTCACCGAGAGGGACGCAAAACTTGTCCCATCAAAGAAAAAGAAGAAGGGGTTCTGGTTCTGGTTTTGCTCCATATTTTGTTCTAAGCTTGAATGA 1551 0.4288 MATMLESEKDPSQPPSRGFVDTVEEITRIYRSLPPRPSIEEVEAATSIVDTLNNEEQTKLNEISMQQPPHDVPEDLFSVLQQLKKTLVLFHTHQQRREALQLLELEKMFQTFGDLIQRASELVSGDTQKQNLPPLPEELVVITDQTETLVKEEEESRKNDFQVIQPSLSAGDGSAEKLSLMKVATVIESCAGSGATTLDLRGKLVDQMEWLPVSIGKLSDVTEMDLSENRIMALPTTIVGLKALTKLDLHSNQLINLPHSFGELINLVDLDLHANRLKSLPATFGNLTNLIDLDLSSNGFTNLPETIGNLRSLKRLNVETNELEELPHTIGNCSSLSVLKLDFNQLKALPEAIGKLEWLETLTLHYNRVKRLPSTVGNLCNLKELDVSFNELEFVPENLCFATNLKKLNLGKNFADLRALPTSIGNLEMLEELDISDNQIKSLPESFRFLSKLRVFRADETPLEVPPRELVKLGAQEVVHYMADFVTERDAKLVPSKKKKKGFWFWFCSIFCSKLE* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01416 516 MobiDBLite consensus disorder prediction 1 21 - -
Lapu3g01416 516 ProSiteProfiles Leucine-rich repeat profile. 429 450 IPR001611 GO:0005515
Lapu3g01416 516 SMART LRR_typ_2 310 333 IPR003591 -
Lapu3g01416 516 SMART LRR_typ_2 334 355 IPR003591 -
Lapu3g01416 516 SMART LRR_typ_2 287 309 IPR003591 -
Lapu3g01416 516 SMART LRR_typ_2 356 378 IPR003591 -
Lapu3g01416 516 SMART LRR_typ_2 264 286 IPR003591 -
Lapu3g01416 516 SMART LRR_typ_2 427 449 IPR003591 -
Lapu3g01416 516 SMART LRR_typ_2 218 240 IPR003591 -
Lapu3g01416 516 SMART LRR_typ_2 241 263 IPR003591 -
Lapu3g01416 516 SMART LRR_typ_2 379 402 IPR003591 -
Lapu3g01416 516 PANTHER LEUCINE-RICH REPEAT-CONTAINING 316 472 - -
Lapu3g01416 516 SUPERFAMILY L domain-like 186 464 - -
Lapu3g01416 516 SMART LRR_bac_2 427 446 - -
Lapu3g01416 516 SMART LRR_bac_2 379 398 - -
Lapu3g01416 516 SMART LRR_bac_2 241 260 - -
Lapu3g01416 516 SMART LRR_bac_2 310 329 - -
Lapu3g01416 516 SMART LRR_bac_2 287 306 - -
Lapu3g01416 516 SMART LRR_bac_2 333 352 - -
Lapu3g01416 516 Gene3D Ribonuclease Inhibitor 174 494 IPR032675 -
Lapu3g01416 516 FunFam Plant intracellular Ras-group-related LRR protein 4 177 485 - -
Lapu3g01416 516 Pfam Leucine rich repeat 266 323 IPR001611 GO:0005515
Lapu3g01416 516 Pfam Leucine rich repeat 381 440 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01416 Lapu-Chr3 15966581 15969318 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01416 158 441 Receptor kinase-like Gene Family AT3G11080 30.519 1.31e-23 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01416 - - gmx:100798442 890.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01416 3 15966581 15969318 Lapu3g01416 3 15966581 15969318 ECH