Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01405 ATGAAAACAAGGAGAGGAAGACGCTCAGAGGCTTTTTGGCCCTCCCTTGTGATGAAGAAGTGGTTAAACATAAAGCCTAAGGTGTATGATTTTAGTGAGGATGAAGTGGACACTGAAACTGAGAGTGAAGATGATGCTTGCTCTCTTAAAGACTCAAGAATGGGTGTGCGTGAAGATAATCCACTTAGAACACCATCCATATTCCCAAGTCAAACATCAGATGCATCTTGTAAGGGCTATAAGATCAGACATAGAAGAGGGAAATCAGAAACTCTGCGTGTTCAATACATAAATACAAAGGAAGTGAGGGTAACAATTGGCACCTGGAATGTTGCTGGAAGACTTCCTTGTAAGGATCTTGAAATTGAGGAGTGGCTTTGCACCAATGAGCCAGCAGATATTTACATTATTGGTTTCCAAGAGGTAGTCCCCTTGAATGCTGGAAATGTTCTTGGAGCAGAGGATAATACACCCATCCGGAATTGGGAAGCAATCATTCGAAGAACTCTAAACAAATCTTCTGAACCTGAAAGCAAGCCAAAAAGCTACAGTGCCCCTCCTTCTCCTGTTCTAAGAACTTCTGCTTCTGCTGATGTTCTAGCAGACAGTATAGATGTTAATCCACTAGACACAATGAATGAGGAGTACTTGGGAACTTTTAAGAATGTTGAACTAGAACAAGAGGAGGTGAAAAGCGTAATTGGCATAGGAAGGAATTTACAGTTGAGGAAAATAAATGACATTGATCTTCAGACCACACTTGACTGGCCTGAACGTCCTTTAGATGCAATCCCACAAACTGATTCCGGTTCAAAATTGCGTAGAGTATGCAGCTCGGACAGAATTGGCTTTAACCTGACAGATAAGGCTTCAAAATATGGAAGTATAATGAAACGGACACATCATAGTTCGGGAAATTTGGGCCTGCTATGGAATGAGCAGCAAGTGATGCCTGAGGAAGAAATTGATACCCTTGATGAGTTATCTGACATTTTATCTGATGAGGAAGATGATGCTTTTCTTGAATTGCCAAATGACAACGAAGATAATGGAATAAGTGCCGTGAAATCACATCGCAAGTATGTGCGGATTGTCAGCAAGCAGATGGTAGGAATATACGTGTCTATTTGGGTGCAGAGGAGGTTGAGAAGGCACATTAACAACTTGAAAGTTTCTCCAGTTGGAGTTGGTCTCATGGGCTACATGGGAAACAAGGGGTCTGTTTCGGTTAGTATGTCTCTGTTTCAGTCACGTTTGTGCTTTGTTTGTTCCCATTTGACTTCTGGTCAGAAGGATGGTGCAGAAATAAGACGAAACTCGGATGTTCATGAAATTCTTCGCCGCACTTGTTTCTCATCTGTCTTTGATACAGATCAGCCACAAACAATCCCATCTCATGATCAAATTTTCTGGTTTGGGGATTTGAATTATCGTATCAATATGATGGATGAGGAGGTTCGAAAGCTGGTAGCCCTAGAGAAATGGGACGAACTCATGAATTACGATCAGCTAACTAACGAATTGCGTAGTGGACATGTGTTCGATGGATGGAAAGAAGGATTGATAAACTTCCCACCCACTTACAAATACGAATTCAATTCAGATATTTATATCGGTGAGAATCCAAAAGAAGGGGAAAAGAAGAGATCCCCAGCATGGTGTGACCGTATATTGTGGTTCGGAAAAGGAATAAAGCAACTTGAATACAAGCGTGCAGAAAATCAGCTCTCAGATCATCGACCAGTTAGTTCAATATTCTCGATTGATGTTGAAGTATTTGACCACCGCAAATTACAACGAGTCCTGAATTTCACAAATGCAGCAGTACATCCTGAGGTTTTCCTCAAGGAAGATGGAGAGTGGTCATACTAG 1872 0.4145 MKTRRGRRSEAFWPSLVMKKWLNIKPKVYDFSEDEVDTETESEDDACSLKDSRMGVREDNPLRTPSIFPSQTSDASCKGYKIRHRRGKSETLRVQYINTKEVRVTIGTWNVAGRLPCKDLEIEEWLCTNEPADIYIIGFQEVVPLNAGNVLGAEDNTPIRNWEAIIRRTLNKSSEPESKPKSYSAPPSPVLRTSASADVLADSIDVNPLDTMNEEYLGTFKNVELEQEEVKSVIGIGRNLQLRKINDIDLQTTLDWPERPLDAIPQTDSGSKLRRVCSSDRIGFNLTDKASKYGSIMKRTHHSSGNLGLLWNEQQVMPEEEIDTLDELSDILSDEEDDAFLELPNDNEDNGISAVKSHRKYVRIVSKQMVGIYVSIWVQRRLRRHINNLKVSPVGVGLMGYMGNKGSVSVSMSLFQSRLCFVCSHLTSGQKDGAEIRRNSDVHEILRRTCFSSVFDTDQPQTIPSHDQIFWFGDLNYRINMMDEEVRKLVALEKWDELMNYDQLTNELRSGHVFDGWKEGLINFPPTYKYEFNSDIYIGENPKEGEKKRSPAWCDRILWFGKGIKQLEYKRAENQLSDHRPVSSIFSIDVEVFDHRKLQRVLNFTNAAVHPEVFLKEDGEWSY* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01405 623 MobiDBLite consensus disorder prediction 43 58 - -
Lapu3g01405 623 MobiDBLite consensus disorder prediction 34 63 - -
Lapu3g01405 623 MobiDBLite consensus disorder prediction 176 190 - -
Lapu3g01405 623 Gene3D Endonuclease/exonuclease/phosphatase 84 187 IPR036691 -
Lapu3g01405 623 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 17 608 IPR045849 GO:0004445
Lapu3g01405 623 FunFam Type I inositol polyphosphate 5-phosphatase 2 82 194 - -
Lapu3g01405 623 SUPERFAMILY DNase I-like 95 606 IPR036691 -
Lapu3g01405 623 Gene3D Endonuclease/exonuclease/phosphatase 311 613 IPR036691 -
Lapu3g01405 623 SMART i5p_5 284 594 IPR000300 GO:0016791|GO:0046856
Lapu3g01405 623 FunFam Type I inositol polyphosphate 5-phosphatase 2 298 612 - -
Lapu3g01405 623 MobiDBLite consensus disorder prediction 171 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01405 Lapu-Chr3 15808149 15813057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01405 353 559 Acyl Lipid Metabolism Gene Families AT2G31830 34.188 2.68e-34 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01405 K24221 - gmx:100807214 1075.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00437 2 3658914 3665272 Lapu3g01405 3 15808149 15813057 PCT