Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01402 ATGGCAGAATTTCCAGGATATTTTCGTTACTGCTTGAACACAGGGAAACTTCTCCTTTTAGCAATTTTGGTCTCTGCAGGAGTTGTATTGCAAATTTTGGCATGTGCGTTGTATAAAAATTGGTGGCCAATGCTAACTGCGATAACATATGTACTTCTTCCAATGCCTTTGTTCTTCTTTGTGGGAGGATCTGAACGTTCTTCTTTATTTTCTGAATCAGATAACAGCTGGGTGAATGCAACCAAGTTCTTGAGTGGGGCATCGGCTGTTGGAAGCATTGCCATTCCAGCCATATTGAAGCATTCTGGTGTTATCAGTTGGGGAGCCCTTGCAATGGAACTCTCTTCATTCTTTGTGTTTGTATCTTCCATAATGTGTTACATAAGGATGAATGATGAAGATGATTATAGTATTCTTTGA 420 0.3976 MAEFPGYFRYCLNTGKLLLLAILVSAGVVLQILACALYKNWWPMLTAITYVLLPMPLFFFVGGSERSSLFSESDNSWVNATKFLSGASAVGSIAIPAILKHSGVISWGALAMELSSFFVFVSSIMCYIRMNDEDDYSIL* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01402 139 Pfam Vacuolar protein sorting 55 18 135 IPR007262 -
Lapu3g01402 139 PANTHER LEPTIN RECEPTOR-RELATED 15 136 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01402 Lapu-Chr3 15746865 15747799 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01402 1 135 EF-hand Containing Proteins AT1G32410 67.407 7.77e-65 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01402 - - gmx:100775400 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00431 2 3608701 3611286 Lapu3g01402 3 15746865 15747799 PCT