Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01389 ATGGATGGTCTCATCAAGGGCTTGGTCGATGTTGCTCTCGGTGGCGCCGATCACAACGATCGCCAAGAAGAACACGGTGAACGCTCCTGGGCTGACCTTGTCTCCGGCGATCAGGATCAGGATCGCCCTCGTCCTCAACATCATCATCAGCAGCAGCAGCAACAGACACAGTGGTCCAACTCATCCCAAAAGGAAGAAGGGTGGGAAGATGATAGTCACAGTTATAGAGCTTCCAACAGGCCTCATCAGGTGAATGAACAGTACCGTCCTCAGCATGAGGAGAACCAATCTCAGAACTTTAACATTTCCCACAAGGTGGATGAAGATCAAGATGGATGGCAGACTGTTGGCAAACCTACAAGGAGGACACACAAGGTTCCGAAGGAAAATTGGCAGAGCTACAAACGACCTTCTGATGAGCAAGAATACTCTAATGAGGCTGAAGTTGGTGCTAGTTTGGAGCCCTCAGAAGATGAACTTGCTGATCTAGCAAGAGCTTGTGACAAACTCTGGGATCTTGATTTAAATCGGTTGATACCTGGCAAAGACTATGAAATTGACTGTGGTGAAGGGAAAAAGGCTTTCCAAAAGGAAGATATGGCGCAGGGGAACTTGTTTACTTGGGTTAGTGATGGTGTATTCAGAAAGCCTACATTTGCTCGTTTTCTCTCACTTTTAGATAATTACAATCCACATCAAGGATGTAAGGAAGTCGTCACATCTGAAGAGAGACAAGAGCAAGCTTCTTTCATAGAAGAAATCAGTAGAACAGCACCAATTAAATATCTTCACAAGTATCTTGCATCCAAGGGAATTGCATCACAGAGTTACCAAGATTTCAAAAGAATGATGACCAATCTGTGGTTTGACCTTTATGGCCGTGGTGGCACTTCTGGTTCCTCTTCTGCTTTTGAGCATGTTTTCGTTGGAGAAATCAAACAATGTGGCGAAGTTTCTGGCTTCCATAACTGGCTGCAGTTTTACCTTGAAGAAGAAAAGGGGAGAGTTGATTATCAGGGCTATATTTTTCCCCGCCGACGGGGACAAATTCCTGACTCGGAAACCCAGCTTCTGACTATTCAGTTTGAATGGAATGGTGTTCTGAAATCTTTATCAAGCACTTTGGTTGGAGTGAGCCCTGAATTTGAAATTGCTTTGTATACCCTGTGTTTTTATGCTGGTGGGGAGGATAACCACATTCAACTCGGTCCATATGCAGTTAATATCAAGTGCTATCGTTTTGGCAATCAGATTGGATCTGTTTTCCCCATTGCAGATTCTTGA 1284 0.4455 MDGLIKGLVDVALGGADHNDRQEEHGERSWADLVSGDQDQDRPRPQHHHQQQQQQTQWSNSSQKEEGWEDDSHSYRASNRPHQVNEQYRPQHEENQSQNFNISHKVDEDQDGWQTVGKPTRRTHKVPKENWQSYKRPSDEQEYSNEAEVGASLEPSEDELADLARACDKLWDLDLNRLIPGKDYEIDCGEGKKAFQKEDMAQGNLFTWVSDGVFRKPTFARFLSLLDNYNPHQGCKEVVTSEERQEQASFIEEISRTAPIKYLHKYLASKGIASQSYQDFKRMMTNLWFDLYGRGGTSGSSSAFEHVFVGEIKQCGEVSGFHNWLQFYLEEEKGRVDYQGYIFPRRRGQIPDSETQLLTIQFEWNGVLKSLSSTLVGVSPEFEIALYTLCFYAGGEDNHIQLGPYAVNIKCYRFGNQIGSVFPIADS* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01389 427 ProSiteProfiles Eukaryotic uridylate-specific endoribonuclease (EndoU) domain profile. 159 427 IPR018998 GO:0004521
Lapu3g01389 427 MobiDBLite consensus disorder prediction 49 63 - -
Lapu3g01389 427 MobiDBLite consensus disorder prediction 122 143 - -
Lapu3g01389 427 CDD XendoU 159 423 IPR018998 GO:0004521
Lapu3g01389 427 Pfam Endoribonuclease XendoU 163 423 IPR018998 GO:0004521
Lapu3g01389 427 MobiDBLite consensus disorder prediction 1 151 - -
Lapu3g01389 427 SUPERFAMILY EndoU-like 161 425 IPR037227 -
Lapu3g01389 427 MobiDBLite consensus disorder prediction 16 48 - -
Lapu3g01389 427 MobiDBLite consensus disorder prediction 78 103 - -
Lapu3g01389 427 PANTHER PLACENTAL PROTEIN 11-RELATED 46 426 IPR039787 GO:0004521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01389 K14648 - gmx:100813919 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01389 3 15529676 15533803 Lapu3g01389 3 15529676 15533803 ECH