Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01318 ATGGCGACAAAGAGCTACTTCAAACAAGAGCATGATCTTGAGAAGAGAAGAGCCGAGGCTGCTAGGATCAGGGAGAAATACCCAGACCGTATCCCGGTGATTGTGGAAAAGGCAGAAAGAAGTGATATTCCAAGTATTGACAAGAAGAAGTACCTTGTCCCCTCTGATCTGACAGTTGGACAATTTGTCTATGTTATCCGCAAAAGGATTAAATTAAGTGCAGAGAAGGCAATATTTATCTTTGTGGACAACGTGCTTCCACCTACAGGAGCAATTATGTCTGCTATATATGAGGAGAAGAAGGAAGAGGATGGGTTTCTTTATGTTACTTACAGTGGGGAGAACACCTTTGGGGATCTGACTTCCCACTAG 372 0.4328 MATKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPSDLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKEEDGFLYVTYSGENTFGDLTSH* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01318 123 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 1 118 IPR004241 -
Lapu3g01318 123 FunFam Autophagy-related protein 1 118 - -
Lapu3g01318 123 Pfam Autophagy protein Atg8 ubiquitin like 15 118 IPR004241 -
Lapu3g01318 123 CDD Ubl_ATG8 13 115 - -
Lapu3g01318 123 Gene3D - 1 118 - -
Lapu3g01318 123 SUPERFAMILY Ubiquitin-like 4 118 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01318 Lapu-Chr3 14478256 14482175 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01318 K08341 - gmx:100818620 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01318 3 14478256 14482175 Lapu3g01318 3 14478256 14482175 ECH