Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01313 ATGGCTTCCAAGGGTGCTCTTCTCTTGTGTCTCAACATCCTGTTTTTCACTGTGGTTAGCTCCACATATGTGCCATGCAACCCACCGCCAAAAGTTCCCAAACACCCACCTGTCCCAAAGCCACCTTCCACAAGCTATGGTAGTTGCCCTGAGAACACCCTTAAGTTTGGTGTGTGCGCTAATGTGTTAGGTTTGGTTGGCGTGCAACTTGGGAAGCCACCAAAGACCCCATGCTGCAGCCTCATTCAGGGTCTGGCTGATCTTGAAGCTGCCGTGTGCCTTTGCACTGCTCTCAGAGCTAATGTGTTGGGCATCAACCTCAATGTCCCCGTCAAGTTGAACTTGCTACTCAACTACTGTGGAAAGAAAACTCCTAAGGATTTCGTCTGCTATTAA 396 0.4949 MASKGALLLCLNILFFTVVSSTYVPCNPPPKVPKHPPVPKPPSTSYGSCPENTLKFGVCANVLGLVGVQLGKPPKTPCCSLIQGLADLEAAVCLCTALRANVLGINLNVPVKLNLLLNYCGKKTPKDFVCY* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01313 131 SMART aai_6 49 130 IPR016140 -
Lapu3g01313 131 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 52 130 IPR036312 -
Lapu3g01313 131 CDD HPS_like 47 130 IPR027923 -
Lapu3g01313 131 Pfam Hydrophobic seed protein 49 130 IPR027923 -
Lapu3g01313 131 PANTHER - 3 130 - -
Lapu3g01313 131 FunFam pEARLI1-like lipid transfer protein 1 47 131 - -
Lapu3g01313 131 Gene3D - 48 131 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01313 Lapu-Chr3 14401160 14401896 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01313 42 130 Acyl Lipid Metabolism Gene Families AT4G22490 38.202 5.35e-15 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01313 - - gmx:100500229 199.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01313 3 14401160 14401896 Lapu3g01313 3 14401160 14401896 ECH