Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01312 ATGGCTTCCAAGGGTGCTCTTCTCTTGTGTTTCAACATCCTGTTTTTCACTGTGGTTAGCTCCACATATGTGCCGTGCAACCCACCCCCAAAAGTTCCCAAACACCCACCTGTCCCAAAGCCACCTTCCACAAGCTATGGTAGTTGCCCTGAGAACACCCTTAAGTTTGGTGTGTGCGCTAATGTGTTAGGTTTGGTTGGCGTGCAACTTGGGAAGCCACCAAAGACCCCATGCTGCAACCTTATTCAGGGTCTGGCTGATCTTGAAGCTGCCGTGTGCCTTTGCACTGCTCTCAAAGCTAATGTGTTGGGCATCAACCTCAATGTCCCCATCAAGTTGAACTTGCTACTCAACTACTGTGGAAAGAAAACTCCTAAGGATTTCGTCTGCTATTAA 396 0.4848 MASKGALLLCFNILFFTVVSSTYVPCNPPPKVPKHPPVPKPPSTSYGSCPENTLKFGVCANVLGLVGVQLGKPPKTPCCNLIQGLADLEAAVCLCTALKANVLGINLNVPIKLNLLLNYCGKKTPKDFVCY* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01312 131 CDD HPS_like 47 130 IPR027923 -
Lapu3g01312 131 SMART aai_6 49 130 IPR016140 -
Lapu3g01312 131 Pfam Hydrophobic seed protein 49 130 IPR027923 -
Lapu3g01312 131 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 52 130 IPR036312 -
Lapu3g01312 131 FunFam pEARLI1-like lipid transfer protein 1 47 131 - -
Lapu3g01312 131 PANTHER - 3 130 - -
Lapu3g01312 131 Gene3D - 48 131 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01312 Lapu-Chr3 14398765 14399160 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01312 42 130 Acyl Lipid Metabolism Gene Families AT4G22490 35.955 4.56e-14 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01312 - - gmx:100500229 207.608
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01312 3 14398765 14399160 Lapu3g01312 3 14398765 14399160 ECH