Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01310 ATGTCTTCCAAAGCTTCTTCCTCCCTTCATCTTTTCCTCACACTCAACCTCCTTTTCTTCTCACTTGTCTCTGCATGCGGTACTTACTCCTGCCCTGGTCCAAACCCCAAGCCAACACCCACCCCCAAGCCTAGTGCCTCGTGCCCCCGTGACGCACTCAAACTAGGTGTATGCGCCAATGTGCTGAACGGGTTGGTGAACGCCACCTTGGGTCAACCACCAGTTACCCCTTGCTGCACCCTTCTCGATGGCCTCGTTGATCTTGAGGCTGCACTGTGCCTCTGCACTGCCCTCAAAGCCAACATTTTGGGCATCAACCTCAACCTTCCCATCTCACTCTCCTTGCTTCTCAATGTTTGCTCAAGACAAGTCCCACGTGATTTCCAATGTGCTTAA 396 0.5278 MSSKASSSLHLFLTLNLLFFSLVSACGTYSCPGPNPKPTPTPKPSASCPRDALKLGVCANVLNGLVNATLGQPPVTPCCTLLDGLVDLEAALCLCTALKANILGINLNLPISLSLLLNVCSRQVPRDFQCA* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01310 131 SMART aai_6 48 130 IPR016140 -
Lapu3g01310 131 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 50 130 IPR036312 -
Lapu3g01310 131 Gene3D - 46 131 IPR036312 -
Lapu3g01310 131 FunFam pEARLI1-like lipid transfer protein 1 46 131 - -
Lapu3g01310 131 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Lapu3g01310 131 PANTHER - 6 130 - -
Lapu3g01310 131 Pfam Hydrophobic seed protein 48 131 IPR027923 -
Lapu3g01310 131 CDD HPS_like 46 130 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01310 Lapu-Chr3 14382476 14383253 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01310 38 130 Acyl Lipid Metabolism Gene Families AT4G22490 40.860 3.96e-15 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01310 - - gmx:100801985 188.348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01310 3 14382476 14383253 Lapu3g01310 3 14382476 14383253 ECH