Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01279 ATGGCGGCGACGAACGCCGGCGCGTTGGTGGAGTCGGTCTCCGCCGACGAAGCGGCGGCGAAGACGGCGCAGAAGCGCTACGAGGGGCTTCTGATGGTTCGTAACAAAGCGATAAAGGGAAAAGGCGCATGGTACTGGACACACTTAGAACCCTTGCTGATTCACAACACCGAAACGGGACTCCCCAAAGCGGTGAAACTCCGTTGCACCCTCTGCGACGCCGTTTTCTCCGCCTCCAACCCCTCACGCACCGCCTCCGAACACCTGAAGCGCGGCACGTGCCCCAATTTCAACTCCGCCGCCAAACCTATTTCCTCTGTCTCCCCCGTTGTTGTTCCATCTTCTTCGCCTTCTTCCGCTTCTCCTTTTACGGTTCACCACAACCACCGCAAGCGAACAACGACCTCGCCTTCTGCTTCGGGTTCCGGTTCGGGTTCCCTCTACCACGCGCCATCGCGGTTCGGGTCGGGTTTGGTTCCGCAGCAGCCGCATTTGGTGCTGTCGGGTGGGAAAGAGGATTTGGGGGCGTTGGCCATGTTGGAGGATAGCGTGAAGAAGCTGAAGAGTCCCAAAACTTCTCCTGGGCCCGCTTTGAGTAAGGCTCAAATCGATAGCGCGATTGAGTTTTTGGGCGATTGGGTATACGAGTCGTGTGGCTCCGTGTCTTTCGCGAGTTTGGAGCACCCGAAGTTCCGAGCTTTTCTTTCACAGGTTGGCTTGCCGGCGGTGTTTCCTCGGGAGCTGACGGGGGCGAGGTTAGAGGCGAGGTTCGAGGAGGCTAAGGTTGAGTCGGAGGCGAGGATCCGGGACGCGATGTTCTTTCAGATTGCGTCTGACGGGTGGAAGTGGAATGGAAATGTGAATGAGAATGGGAAGAGTTACGACTCTGGGTTGGTGAATTTGAGCGTGAATCTTCCGAATGGGACCAGTTTGTACAGAAGGGCGTTGTTTGTTACTGCTTCTGCGCCTTCCAAGTATGCGGAGGAGGTTCTGTGGGAGACAATCACTGGCATTTGTGGGAATCTCGTGGAACAGTGTGTTGGGATAGTTGCAGACAGGTTCAAGGCCAAGGCCTTGAAAAACTTAGAGAATCAGAATCATTGGATGGTTAATCTCACTTGTCAGTATCAGGGCTTCAACAGTTTGATAAAGGACTTCGCCAAGGAGCTCCCCATGTTCAGGGCCGTGGTTCACAATTGTCTCAAGCTCGCCAATTTGTTCAATTACACCTCTCAGGTGAGGAACAGTTTCCATAAGTACCAGCTGCAGGAGTACGGCCATACCTGGATGCTCCGGGTGCCCCTGCACGAGTTTGAGTTGGGGCCTGTCTATGCTATGATGGAGGACACGTTGAGCTCGGTTCGCGCCTTGCAGTTGGTGCTGCTGGATGAGCCTTTCAAGATGGTGGCCATTGAGGACCAGGGCGCCCGGGAGGTTGGGGACATGATTCGGGATGTGGGGTTCTGGAAGGACTTAGAAGCCGTTCATGGTTTGGTGAAATTGGTGAAGGACATGGCTCAGGAGATTGAGGCAGAGAGGCCTCTGGTTGGGCAATGCCTTCCCCTTTGGGATGAGTTGAGGGCAAAAGTAAAGGATTGGTGCTCCAAGTTCCACATTGCAGAAGGGGTGGTGGAGAAGCTGGTTGAGAGAAGGTTCAAGAAGAATTACCATCCTGCTTGGGCTGCTGCTTACATTCTTGACCCGCTTTACTTGGTGAGGGACACCAGTGGCAAGTACCTTCCACCGTTTAAGTACTTGACGCCGGAACAGGAGAAGGATGTTGATAGGCTCATAACTAGGCTTGTTGCAAGAGACGAAGCTCATATTGCTCTGATGGAGCTCATGAAGTGGAGGACGGAAGGGCTTGACCCGGTATATGCTCAAGCTGTTCAGATGAAGGAGAGGGATCCAGTCACTGGGAAGATGAGGATTGTCAATCCACAGAGTAGCAGGCTTGTCTGGGAAACTTATTTGACTGAATTCAAGTCCTTGGGGAAAGTTGCAGTTAGGTTGATATTCCTTCATGCAACCTCATGTGGCTTCAAATGCAATTGGTCCTTGTGGAGATGGGTCTGTGCTCATGGCCATCACTCCAGGACTGCACTCAACAAGGTGCAGAAGTTGATATTTATTGCAGCTCATTCCAAACTTGAGAGAAGGGATTTTTCCAGTGATCAAGAGAAGGACGCAGAGCTGTTCACCTTGGCAAATGGTCGTGAGGTTCATGCAGAGCCATTGGATGATGAATCCCATGACCATGATTTGTGA 2268 0.5282 MAATNAGALVESVSADEAAAKTAQKRYEGLLMVRNKAIKGKGAWYWTHLEPLLIHNTETGLPKAVKLRCTLCDAVFSASNPSRTASEHLKRGTCPNFNSAAKPISSVSPVVVPSSSPSSASPFTVHHNHRKRTTTSPSASGSGSGSLYHAPSRFGSGLVPQQPHLVLSGGKEDLGALAMLEDSVKKLKSPKTSPGPALSKAQIDSAIEFLGDWVYESCGSVSFASLEHPKFRAFLSQVGLPAVFPRELTGARLEARFEEAKVESEARIRDAMFFQIASDGWKWNGNVNENGKSYDSGLVNLSVNLPNGTSLYRRALFVTASAPSKYAEEVLWETITGICGNLVEQCVGIVADRFKAKALKNLENQNHWMVNLTCQYQGFNSLIKDFAKELPMFRAVVHNCLKLANLFNYTSQVRNSFHKYQLQEYGHTWMLRVPLHEFELGPVYAMMEDTLSSVRALQLVLLDEPFKMVAIEDQGAREVGDMIRDVGFWKDLEAVHGLVKLVKDMAQEIEAERPLVGQCLPLWDELRAKVKDWCSKFHIAEGVVEKLVERRFKKNYHPAWAAAYILDPLYLVRDTSGKYLPPFKYLTPEQEKDVDRLITRLVARDEAHIALMELMKWRTEGLDPVYAQAVQMKERDPVTGKMRIVNPQSSRLVWETYLTEFKSLGKVAVRLIFLHATSCGFKCNWSLWRWVCAHGHHSRTALNKVQKLIFIAAHSKLERRDFSSDQEKDAELFTLANGREVHAEPLDDESHDHDL* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01279 755 SUPERFAMILY Ribonuclease H-like 329 711 IPR012337 -
Lapu3g01279 755 MobiDBLite consensus disorder prediction 110 146 - -
Lapu3g01279 755 PANTHER OSJNBA0013A04.12 PROTEIN 24 719 - -
Lapu3g01279 755 MobiDBLite consensus disorder prediction 110 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01279 Lapu-Chr3 13844637 13849244 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01279 - - pvu:PHAVU_003G215500g 1455.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01279 3 13844637 13849244 Lapu3g01279 3 13844637 13849244 ECH