Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01255 ATGGGTTTCCCAGCCAACGGCACCACCTCCTCCGACCGCCCCATCAAGTTCCTTATCTACGGCCGTACGGGCTGGATTGGTGGCCTCCTCGGCACTCTCTGCCGGGCCCAAGACATCCCCTTCCAGTACGCCTCCGGCCGTCTCGAGAACCGGGCCTCCCTCGAAAAGGACATAGCCGAGGTCAAGCCCACCCACGTCTTCAACGCCGCTGGTGTCACGGGCCGCCCCAACGTCGACTGGTGCGAGTCCCACAAGGTCGACACCATCCGAACCAACGTCGTTGGAACCCTCACTCTCGCCGACGTCTGCCGCCACCACGGCCTCCTCCTCCTCAACTACGCCACCGGTTGCATCTTCGAGTACGATTCCGCTCATCCTCTCGGATCCGGAATCGGCTTCAAAGAACACGACACTCCCAATTTCACCGGTTCCTTCTACTCTAAGACCAAGGCCATGGTAGAGGATCTGCTTAAGAACTACGACAATGTGTGTACCCTGCGAGTGAGGATGCCTATCTCGTCTGATTTATCGAATCCCCGGAATTTCATCACGAAGATCACTCGATACGAGAAGGTTGTGGATATCCCGAATTCCATGACTATATTGGATGAACTTCTTCCCATCTCCATCGAGATGGCGAAGAGGAATCTCACTGGGATCTGGAACTTCACTAACCCTGGAGTGGTTAGTCACAATGAAATTCTAGAGATGTACAGAGAGTATGTTGACCCCAACTTCACCTGGAAAAACTTCACTCTCGAGGAACAGGCTAAGGTGATTGTTGCCCCCAGGAGCAACAATGAGCTTGATGCTACCAAATTGAAGACGGAATTTCCAGAACTGCTCTCTATCAAGGACTCCCTCATTAAGTATGTCTTCCAGCCCAACCACAAGGTTAAAGCATAA 906 0.5331 MGFPANGTTSSDRPIKFLIYGRTGWIGGLLGTLCRAQDIPFQYASGRLENRASLEKDIAEVKPTHVFNAAGVTGRPNVDWCESHKVDTIRTNVVGTLTLADVCRHHGLLLLNYATGCIFEYDSAHPLGSGIGFKEHDTPNFTGSFYSKTKAMVEDLLKNYDNVCTLRVRMPISSDLSNPRNFITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYREYVDPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKTEFPELLSIKDSLIKYVFQPNHKVKA* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01255 301 Pfam RmlD substrate binding domain 16 188 IPR029903 -
Lapu3g01255 301 CDD dTDP_HR_like_SDR_e 16 288 - -
Lapu3g01255 301 Gene3D - 6 301 - -
Lapu3g01255 301 FunFam Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase 6 301 - -
Lapu3g01255 301 PANTHER DTDP-4-DEHYDRORHAMNOSE REDUCTASE 16 298 IPR005913 -
Lapu3g01255 301 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 288 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01255 Lapu-Chr3 13572873 13574743 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01255 K12451 - gmx:100781643 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01255 3 13572873 13574743 Lapu3g01255 3 13572873 13574743 ECH
Lapu3g01255 3 13572873 13574743 Lapu3g01255 3 13572873 13574743 PCT