Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01251 ATGGCTCTTTGGGGGTGGAGGTTCTTTTTTGCAGCTCTTCCTGGGATTCTTTTCTCAACTCACCTCTGCGCTGCCCAAAAAGTTCCGAACTACACATTTATCCACAATGCAACGACGGCACCAGACATCTCATACTACGACTACATTGTAATTGGCGGCGGCACAGCAGGTTGTCCTCTCGCTGCGACACTGTCCCAGAATTACAGCGTGTTGCTTCTTGAACGCGGTGGCTCACCCTACGGCAACCCCAACATCAGCAACTTAGCAGCCTTCGGTGCTTCCCTCTCTGACACCTCCCCTACCTCTCCCGCTCAACGTTTCATCTCCGAAGACGGCGTCATCAACTCAAGAGCCCGCGTCCTCGGCGGCGGAAGTTGCTTGAACGCTGGATTTTATTCTCGCGCCAGCCCACAGTATGCAAGGGAAGCGGGGTGGGATGGAAGGGCAGTGAATGAGTCGTTTGAATGGGTGGAGAAGATAGTGGCATTTGAGCCAGAAGTGAAGCAGTGGCAGTCAGCTGTGAGGGAAGGACTACTTGAGATAGGTGTTGTGCCTAATAATGGCTTCACTTATGATCACATTGGTGGGACTAAGATAGGGGGCACCATCTTTGACCACCAAGGCTTCAGGCACACTGCTGCTGATCTTTTGCAATATGCAAAACCCTCTGCAATTACCCTCCTTCTGCATGCCACCGTGCACAGGATCTTGTTTCGAGTCAAAGATGGATCAAAACCAATGGCCCATGGAGTGGTGTTCAGAGATTCATCGGGTCGTAAACACAGGGCGTATCTGAAGCGGCATCCCAGGAGCGAGATCATTGTGTCGGCTGGTGCGCTTGGAAGCCCACAACTTCTAATGTTGAGTGGAGTTGGCCCCGCAGAGCACCTTCGGACACATAACATCAGCATAACATTGGACCAGCCGTTGGTGGGTCAGGGAATGTCAGATAACCCCATGAATGCCATCTTTGTTCCATCTCCTGCGCCGGTGGAGATATCTCTGATTGAGGTGGTGGGCATCACCAGTTTTGGCAGTTACATTGAAGCTGCCAGCGGTGAAAACTTCAACGGTGGTTCCCCTAGGGACTACGGAATGTTCTCACCCAAGATTGGTCAACTGTCGAAGGTGCCTCCAAAGCAAAGGACCGCAGAGGCACTGGCTAAGGCAACAGAAGCGATGCAGAGTCTGGACCAAGCAGCCTTCAGAGGAGGGTTCATCTTGGAGAAGATAATGGGTCCGATTTCAAGCGGGCATTTGGAGCTCCGAACCCGCGACCCAAACGACAACCCGTCTGTGACCTTCAACTACTTCCAGGAGCCCCGAGACTTGGAGAGGTGCGTGCAGGGCCTTAGCACGGTGGAGAAGATAATCGAATCCAAGGCATTCGCTCCCTTCAGATACCCCAACATGCCACTCTCTGTGCTTCTCAACATGACCGCAAATTCCCCTGTTAACTTGCTCCCCAAACACACCAATTCTTCCCTCTCTCTCCAACAGTTCTGCAGAGACACAGTGATGACCATTTGGCACTACCACGGAGGCTGCCAAGTTGGCAAAGTTGTTGACAGAGACTACAAGGTTCTTGGTGTCGATGCACTTCGCGTTATCGATGGTTCCACCTTTAACTACTCTCCTGGGACTAATCCTCAGGCCACTGTTATGATGCTTGGCAGGTACATGGGACTTCAAATATTGACTCAGAGACTTGCTGCGGATCAAACAGACCAATAA 1734 0.519 MALWGWRFFFAALPGILFSTHLCAAQKVPNYTFIHNATTAPDISYYDYIVIGGGTAGCPLAATLSQNYSVLLLERGGSPYGNPNISNLAAFGASLSDTSPTSPAQRFISEDGVINSRARVLGGGSCLNAGFYSRASPQYAREAGWDGRAVNESFEWVEKIVAFEPEVKQWQSAVREGLLEIGVVPNNGFTYDHIGGTKIGGTIFDHQGFRHTAADLLQYAKPSAITLLLHATVHRILFRVKDGSKPMAHGVVFRDSSGRKHRAYLKRHPRSEIIVSAGALGSPQLLMLSGVGPAEHLRTHNISITLDQPLVGQGMSDNPMNAIFVPSPAPVEISLIEVVGITSFGSYIEAASGENFNGGSPRDYGMFSPKIGQLSKVPPKQRTAEALAKATEAMQSLDQAAFRGGFILEKIMGPISSGHLELRTRDPNDNPSVTFNYFQEPRDLERCVQGLSTVEKIIESKAFAPFRYPNMPLSVLLNMTANSPVNLLPKHTNSSLSLQQFCRDTVMTIWHYHGGCQVGKVVDRDYKVLGVDALRVIDGSTFNYSPGTNPQATVMMLGRYMGLQILTQRLAADQTDQ* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01251 577 ProSitePatterns GMC oxidoreductases signature 2. 278 292 IPR000172 GO:0016614|GO:0050660
Lapu3g01251 577 Gene3D - 46 558 IPR036188 -
Lapu3g01251 577 SUPERFAMILY FAD/NAD(P)-binding domain 44 568 IPR036188 -
Lapu3g01251 577 PIRSF Alcohol_oxidase 21 577 IPR012132 GO:0050660
Lapu3g01251 577 Pfam GMC oxidoreductase 414 559 IPR007867 GO:0016614
Lapu3g01251 577 SUPERFAMILY FAD-linked reductases, C-terminal domain 315 515 - -
Lapu3g01251 577 Gene3D - 163 508 - -
Lapu3g01251 577 PANTHER OSJNBA0019K04.7 PROTEIN 16 570 - -
Lapu3g01251 577 Pfam GMC oxidoreductase 46 319 IPR000172 GO:0016614|GO:0050660
Lapu3g01251 577 Coils Coil 380 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01251 Lapu-Chr3 13524011 13529581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01251 3 577 Miscellaneous Gene Families AT5G51950 56.089 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01251 - - gmx:100796752 1042.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01251 3 13524011 13529581 Lapu3g01251 3 13524011 13529581 ECH