Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01234 ATGTTTTTGAACTCCATGAACTCTCGCGAGGCTACTTTGGTTGCCACGGCAATGGTGGTTGGCGCCATGGCCTCTGCAATTGGTTTCCGCTTCTTCTCCCGCTCCCAAACGCGCGCGAAATCATCCCAAAACGGCACCGTTTCTTCTCCTCAGGATCCTTTCGACCCTTCCAAGCGAAAAGGGTACTTATCTTGGGATGACTATTTTATGGCAATTGCGTTTTTGTCAGCTGAGAGGTCCAAAGACCCTAACAGGCAGGTTGGGGCTTGTTTGGTGAGTCAAGATGGTATAATTCTTGGAATTGGTTATAATGGGTTTCCAAGGGGTTGTTCTGATGACAAGCTACCCTGGGCAAAGAAATCCAGGACTGGGAATCCTTTGGAGACAAAGTACCCTTATGTTTGTCATGCAGAAGTAAATGCCATTCTTAACACAAATCATGCCTCTGCTGCTGGACAACGGCTATATGTGACCATGTTTCCTTGCAATGAATGTGCTAAGATCATAATCCAGTCAGGAGTTTCTGAAGTAATTTATTTCGTGGAGAAGAGATTAGAAAATTCAGATATTGCATACGCAGCCTCTCACAAGCTACTTTCATTAGCTGGTGTAAAGGTCAGGAAACATCAACCACTGATGAATGGAATTCATCTGAAGTTTGAGGAGCACTAG 672 0.4494 MFLNSMNSREATLVATAMVVGAMASAIGFRFFSRSQTRAKSSQNGTVSSPQDPFDPSKRKGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQDGIILGIGYNGFPRGCSDDKLPWAKKSRTGNPLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQSGVSEVIYFVEKRLENSDIAYAASHKLLSLAGVKVRKHQPLMNGIHLKFEEH* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01234 223 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 64 206 IPR002125 -
Lapu3g01234 223 CDD deoxycytidylate_deaminase 66 179 IPR035105 -
Lapu3g01234 223 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 64 180 IPR002125 -
Lapu3g01234 223 FunFam Deoxycytidylate deaminase 55 223 - -
Lapu3g01234 223 SUPERFAMILY Cytidine deaminase-like 66 214 IPR016193 GO:0003824
Lapu3g01234 223 PANTHER DEOXYCYTIDYLATE DEAMINASE-RELATED 45 223 IPR015517 -
Lapu3g01234 223 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 136 169 IPR016192 GO:0008270|GO:0016787
Lapu3g01234 223 Gene3D Cytidine Deaminase, domain 2 56 223 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01234 K01493 - gmx:100792003 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01234 3 13263468 13267235 Lapu3g01234 3 13263468 13267235 ECH