Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01224 ATGGCGGATCCAATCCCGGCACCGGCACCACCAAGATCCGCCACGGACCTCTTCTCGGATCCCCTCGATGCCCACCCTCTGTGGTTCAAACCGGCGTCGTTCCTGTCCCCAGACTTCGATTCCGAGTCCTACATTTCGGAGCTTCGCACTTTTGTCCCCTTCGACACGCTCCGCTCCGAGCTCAACAACTACCTCTCTTCCCTCAACCACGAACTGATTGACCTCATCAACCGTGACTACGCTGATTTCGTCAATCTCAGCACCAAGCTCGTGGACGTCGACGCAGTTGTGGTGCGAATGCGGGTCCCACTGATCGAGCTCCGGCAGAAGATCGAGCAGTTCAGAGGATCCGTTGAGGTTTCGCTGGTTTCCATTAAGAACCGCTTGAACCAAAGATCGGAGGCGGCCTCCGCTAGAGAGACGTTGGAGCTTCTCCTCGACACGTTTCACGTCGTCTCTAAGGTCGAGAAGCTAATAAAAGAGCTGCCTAGTGTACCCACGGATTGGTCAAATGGAGATGTAAATTTGTCAGAGAGGAATTACTTGAGCAATGGAGTTTCTGTGCAGCAGGTTGAGAATGAGACAAGTATCAGAGAGACTCAAAGCATGCTGTTGGAAAGAATTGCCAGTGAGATGAACAGACTAAAGTTCTATGTAACTCATGCAAAGAACCTTCCTTTTATTGAGAATATGGAGAAGAGGATTCAAAATGCAAGCCTAACAGTAGATGCAAGCTTGGGACACTGCTTTGTAAATGGTTTAGAGCATCGGGATGCAACTGCAATTTACAATTGCTTACGTGCGTATGCTGCTGTAGATAACACCAAGAATGCAGAAGAAATCTTTCGAATTACTGTTGTTGCACCATTGATTCAGAAGATAATTCCACATGGATCATCAGCTGTGGTGGCTGGATCATCTGGGGATGGTCTTGAAAATGATTATCAACTAATTAAGGAATGCATTGACAAAGACTGTAAATTTTTATTGGAAATTTCTTCATCTGAAAATTCAGGTTTGCACGTATTCGACTTCTTAGCCAATTCAATCCTTAAAGAGGTTCTCTCTGCAATTCAGAAGGGAAAGCCAGGTGCTTTTTCTCCTGGAAGACCAACAGAGTTCTTGAAAAATTACAAATCAAGCTTAGATTTCTTGGCTTATCTAGAAGGCTACTGTCCTTCCAGATCTTCTGTTGCTAAATTTCGATCTGAAGCAATTTATACTGAATTTATGAAGCAATGGAATATAGGAGTATATTTCTCCTTGAGGTTTCAGGAAATAGCAGGGTCTCTAGATTCTGTGCTTACGACATCCACTCTTGTCCCTGTTCAAAATTCAGAAGTCGGTGAAAAAAATTACGAAGGTTTAACATTAAAGCAAAGTGTTACTCTGTTGGAGTGTTTGAGATCATGCTGGAGAGAAGATGTTCTTGTCCTTTCTTGTTCTGACAGATTCCTTCGGCTATCCTTGCAGCTTCTTTCTAGGTACTCAAGCTGGCTGTCATCTGGACTGACTGCGCGGAAAAATCACAACACAAGCGCTGGTTCTGGGTGTGAATGGGCTGTTTCAGCTGTCATAGATGACTTCATTTTTGTTATTCATGATATAAGATATTTGGAGGAGCAGGTTCGTGGTGATTACCTACAACACGTGCTTGAGCTTTTGTCTTCATGCTCCCCTGATGTTCTGGAATTAATAAGGCAGAGCATTTTACTGGGTGGTCAATCATTAAAATCTATAGAACCTTTAGTCATCAAAGCAGTGGTGGAGTCATTAGTGGAAAAGTCAGTTGAGGATTTGAGACAAATGAAGGGGATAACAGCAACCTATAGGATGACTAATAAACCACTACCTGTGAGGCATTCACCATATGTTTCCGGGGTATTGCGTCCCCTTAAGGCCTTTTTGGATGGGGAGAGAGCTACAAGATATTTGGCCAGTGACACTAGGAACGAAATACTCCTTTCTGCTGCAACTGAGATTACTGACCGTTATTATGAATTAGCCGCTGACCTTGTTAGCGTGGCAAGAAAGACAGAGTCATCCCTCCAGAAAATTAGGCAGAGTGCACAAAGGCGAGCTGGAGCAAGTTCAGATATCTCAGATAATAATGTGTCTGACACTGATAAAATCTGTATGCAGTTGTTCCTTGATATTCAGGAGTATGCCCGTAACCTCTCTGCTCTTGGGGTTGAAGCAGTCAATATTGCATCCTACCGTTCATTATGGCAATGTGTGGCTCCTGCAGATAGGCAAAACACTATTAATCTCTAA 2274 0.4411 MADPIPAPAPPRSATDLFSDPLDAHPLWFKPASFLSPDFDSESYISELRTFVPFDTLRSELNNYLSSLNHELIDLINRDYADFVNLSTKLVDVDAVVVRMRVPLIELRQKIEQFRGSVEVSLVSIKNRLNQRSEAASARETLELLLDTFHVVSKVEKLIKELPSVPTDWSNGDVNLSERNYLSNGVSVQQVENETSIRETQSMLLERIASEMNRLKFYVTHAKNLPFIENMEKRIQNASLTVDASLGHCFVNGLEHRDATAIYNCLRAYAAVDNTKNAEEIFRITVVAPLIQKIIPHGSSAVVAGSSGDGLENDYQLIKECIDKDCKFLLEISSSENSGLHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTEFLKNYKSSLDFLAYLEGYCPSRSSVAKFRSEAIYTEFMKQWNIGVYFSLRFQEIAGSLDSVLTTSTLVPVQNSEVGEKNYEGLTLKQSVTLLECLRSCWREDVLVLSCSDRFLRLSLQLLSRYSSWLSSGLTARKNHNTSAGSGCEWAVSAVIDDFIFVIHDIRYLEEQVRGDYLQHVLELLSSCSPDVLELIRQSILLGGQSLKSIEPLVIKAVVESLVEKSVEDLRQMKGITATYRMTNKPLPVRHSPYVSGVLRPLKAFLDGERATRYLASDTRNEILLSAATEITDRYYELAADLVSVARKTESSLQKIRQSAQRRAGASSDISDNNVSDTDKICMQLFLDIQEYARNLSALGVEAVNIASYRSLWQCVAPADRQNTINL* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01224 757 Pfam COG (conserved oligomeric Golgi) complex component, COG2 27 158 IPR024602 -
Lapu3g01224 757 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 11 754 IPR009316 GO:0007030|GO:0015031|GO:0016020
Lapu3g01224 757 Pfam COG complex component, COG2, C-terminal 591 719 IPR024603 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01224 K20289 - gmx:100817096 1356.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01224 3 13156935 13163164 Lapu3g01224 3 13156935 13163164 ECH