Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01201 ATGTCACCTCCCATTCCTGTTCCTATTGCTATTGATATCAAAGATATAAAAGATAAGCTCTCTTTTCAGTTGCGACCTTGGCAACGTTCCTTCCAATTCTGGGTTCGAGCCATTGACATTTACACCGGATACAAGGTGTTTCAAGTGAGAGTCAATTTTGTCAAAGATGTGCAGAAGCAGGAAGCAATGTGGGAACGACAGCACGAGCTTGCTGCAGACAAGATTTTCGCCTTGTGTTCTGACCTCGGAGGTTTCTTCCTCAAGATTGCCCAAATTATAGGGAAGCCTGATTTGGCTCCGGCTGCATGGGTGAAAAGACTTGTTACGCTGTGTGATAGAGCTCCTCCTACCCCTTTTGATGTGATGAAACTAGTTTTGGAGAATGAGTTGGGACAGGGTATTGATGATGTGTTCGAGAGGTTCGATGTTGAACCCCTAGGTTCTGCTTCAATTGCTCAGGTTCATAGAGCAAGACTGAAAGGTGATACAAGTGATGTTGTCATCAAGGTTCAACATCCTGGAATTCAGGAGCTGATGATGACAGATATCCATAACTTGCAAGCGTTTGCACTGTACATGCAAAAGACAGATATCAAATTTGATCTATATTCAGTGACTAGGGAAATGGAAAAACAGATTGGATATGAATTTGACTTCATGAGGGAGGCTGATGCAATGGAAAGGATAAGAAAGTTTTTGTATGAGAATAACAAAAAGACTCCTGTTTTGGTGCCACGAATAATACGAGATATGGTTACTAGGAGGGTCCTAGTCATGGAATATATTGATGGGGTTCCAATAATGAACCTTGGTGATGAAATAGCAAAGAGAGGAATAAATCCTCGTGGTAAGGTTGCAGCAGCAGCAAAAAAGAAAATTCTTCAAAGCTTGACTCTAGCATATGGTCAGATGATTTTAAAAAGTGGATTCTTTCATGCAGATCCTCATCCAGGAAACATCCTGATTTGTAAAGGATCAGAGGTTGCCTTGCTAGACTACGGGCAGGTGAAGGATCTCCCAGAACAGTTGAGGCTTGGCTATGCTAATCTAGTTCTTGCAATTGCTAATGGTGACCCATTAAGAGCTGCAGAGAGCTATAGGGAACTTGGTATAGAAACCTTGAGCAACTGTGAAAATGGGCTACAGGAATTGTTTAAACTAGCAGAGACAATGTTTGATACAAAACTGCCTCCTGGGGTAGTAATGCTGCAACCTTTCTCAGATGAATCTTCAATTAAAAAAGTTGCTGTTCAGTCCTTTCCAGAAGAACTGTTTTCTGTACTTCGGACAGTGCATCTACTGAGGGGACTTAGCGTTGGACTTGGAATCAATTATTCTTGTGCAGAACAGTGGAGGCCTTTTGCAGAAGAAGCTTTGTCCCAAGCTGGCCGATTAAAAGATAAGAATGTTAAGCCCAGAGGCAGGTAA 1428 0.4209 MSPPIPVPIAIDIKDIKDKLSFQLRPWQRSFQFWVRAIDIYTGYKVFQVRVNFVKDVQKQEAMWERQHELAADKIFALCSDLGGFFLKIAQIIGKPDLAPAAWVKRLVTLCDRAPPTPFDVMKLVLENELGQGIDDVFERFDVEPLGSASIAQVHRARLKGDTSDVVIKVQHPGIQELMMTDIHNLQAFALYMQKTDIKFDLYSVTREMEKQIGYEFDFMREADAMERIRKFLYENNKKTPVLVPRIIRDMVTRRVLVMEYIDGVPIMNLGDEIAKRGINPRGKVAAAAKKKILQSLTLAYGQMILKSGFFHADPHPGNILICKGSEVALLDYGQVKDLPEQLRLGYANLVLAIANGDPLRAAESYRELGIETLSNCENGLQELFKLAETMFDTKLPPGVVMLQPFSDESSIKKVAVQSFPEELFSVLRTVHLLRGLSVGLGINYSCAEQWRPFAEEALSQAGRLKDKNVKPRGR* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01201 475 CDD ABC1_ADCK3-like 110 365 - -
Lapu3g01201 475 SMART serkin_6 140 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01201 475 Gene3D Transferase(Phosphotransferase) domain 1 136 349 - -
Lapu3g01201 475 PANTHER ABC1 FAMILY PROTEIN 25 459 - -
Lapu3g01201 475 ProSiteProfiles Protein kinase domain profile. 140 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g01201 475 SUPERFAMILY Protein kinase-like (PK-like) 112 337 IPR011009 -
Lapu3g01201 475 Pfam ABC1 atypical kinase-like domain 110 364 IPR004147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01201 Lapu-Chr3 12924188 12934575 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01201 K08869 - gmx:100813009 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01201 3 12924188 12934575 Lapu3g01201 3 12924188 12934575 ECH