Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01200 ATGGAAGGAGAAGAGGGTTCTCAGCAGCCACAGTTGGTACTCGCCGACAAGCTATTCCTTCTTCGACAACCCGATGTGCAGGACATTGACAAGGTTCGCTACAAAGAGGATGTTTTCACTCATGTCAAGGAAAACGATATGGTCCCTTTGTACGAAACCCTAGTCGCCGACTCCGTGTTGGACATGGATCGTGCCCTTTTGGATTCCATGCGCGCTAAAACTGAGGACGAACTTAACAAGATCGACGAAAAGATTGCTGATGCAGAGGAAAACTTAGGTGAGAGTGAAGTTCGGGAGGCTCACTTGGCAAAATCCTTGTTTTTCATCCGAATTGGGGACAAGGAGAAAGCCTTGGAACATCTCAAGATAACGGAAACCAAGACTGTTGCAGTTGGCCAGAAGATGGATCTGGTTTTTTATACTTTGCAGCTAGGTTTCTTTGACATGGATTTTGATCTCATTTCCAAAAGCATTGACAAAGCGAAAAACTTGTTTGAAGAAGGTGGTGATTGGGAAAGAAAGAATAGGCTGAAAGTGTATGAAGGCCTGTACTGCATGTCCACTCGAAATTTCAAGAAGGCTGCGAAGTTGTTTTTGGATTCTATTTCAACCTTTACAACCTATGAACTCTTTCCGTATGACACCTTTATATTTTATACGGTTTTGACCAGCATTATATCGTTGGACAGAGTTTCCTTAAAGCAAAAGGTGGTAGATGCCCCAGAGATCTTGACAGTGATCGGCAAAATCCCATATCTTTCAGAGTTTTTGAACTCCTTATATGATTGTCAATACAAGTCTTTCTTCTCAGCATTTGCTGGTCTGACGGAGCAGATTAAGTTGGACCGCTATCTGCATCCCCACTTCCGATATTACATGAGGGAGGTCAGAACTGTTGTGTACTCCCAATTTTTAGAATCGTACAAAAGTGTGACAATTGAAGCCATGGCCAAAGCTTTTGGAGTGACAGTGGATTTTATTGATCTGGAGCTATCACGTTTTATTGCAGCAGGGAAACTTCATTGTAAGATTGATAAGGTTGCTGGTGTTCTTGAAACTAACCGCCCTGATGCCAAGAATGCCCTTTACCAAGCAACTATTAAGCAGGGGGACTTCCTATTGAATCGGATTCAGAAATTGTCACGTGTTATAGATCTTTAG 1161 0.4264 MEGEEGSQQPQLVLADKLFLLRQPDVQDIDKVRYKEDVFTHVKENDMVPLYETLVADSVLDMDRALLDSMRAKTEDELNKIDEKIADAEENLGESEVREAHLAKSLFFIRIGDKEKALEHLKITETKTVAVGQKMDLVFYTLQLGFFDMDFDLISKSIDKAKNLFEEGGDWERKNRLKVYEGLYCMSTRNFKKAAKLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLHPHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGVTVDFIDLELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALYQATIKQGDFLLNRIQKLSRVIDL* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01200 386 ProSiteProfiles PCI domain profile. 190 358 IPR000717 -
Lapu3g01200 386 Gene3D - 26 337 - -
Lapu3g01200 386 Pfam 26S proteasome subunit RPN7 63 236 IPR045135 -
Lapu3g01200 386 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 287 370 IPR000717 -
Lapu3g01200 386 SUPERFAMILY "Winged helix" DNA-binding domain 282 363 IPR036390 -
Lapu3g01200 386 FunFam 26S proteasome regulatory subunit N7 11 337 - -
Lapu3g01200 386 Pfam PCI domain 254 354 IPR000717 -
Lapu3g01200 386 Coils Coil 71 98 - -
Lapu3g01200 386 PANTHER 26S PROTESOME SUBUNIT 6 10 386 IPR019585 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01200 K03037 - gmx:100810692 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01200 3 12918308 12922196 Lapu3g01200 3 12918308 12922196 ECH