Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01171 ATGGGTTCTGCTAACGGACTAATTTCCGCAGAGGGGAAGCAACCTCTCTTTTCTTTTGGATTGATATCTGACGTGCAGTATGCTGACATTCCTGATGGTAGGTCGTTCCTTGGTGTTCCACGTTACTATAGGCATAGCATTCGTGTGTTGCAGAGAGCAGTAAAAGATTGGAATACTAATAAGAACCACAAGTTTGTGATAAATTTTGGAGATATTGTTGATGGATACTGTCCAAAAGATCAATCTCTTATCACTGTAAAGAAAATTGTGGATGAATTTGAGATGTTCAATGGACCTGTGTATCATTTGATTGGCAATCACTGCCTTTACAATCTGCCTCGGAGTAAGTTACTTCCATTATTGAAGATCCGGAGTTTTGGAAGCCATGCTTACTATGACTTTTCACCAGTGCCTGAATATAGATTTGTAGTTCTAGATGGCTATGACATAAGTGCAATTGGCTGGCCTCAAGATCATCCAAAAACATTGGAGGCCTTGAAATTCCTCCGGGAAAAGAATCCGAACGATGACAAGAACAGTCCAACAGGTTTGGTGGGCCTTGAAAGAAGGTTTCTTATGTTCAATGGAGCTGTTGGAAAGGAACAAATAGAATGGTTGGGTAGTGTTCTTCAGGAAGCCACAAAATTGAAACAGAAGATAGTGATATGTTGCCATATGCCTCTAGATCCTGCTGCATCATCCAATGAGGCACTGTTGTGGAATTATGATGAAGTAATGAATTTGATACGCAGATACACTTGTGTGAAGCTGTGTCTATCTGGACATGATCACAAAGGAGGATATTCCATAGATTCCCATGGAATTCACCATAGAGTTCTTGAAGCTGCCCTGGAATGTCCTGCTGGCACGGATGCGTTTGGATATGCTGAAGTTTTTGACGATAGAATATCACTTTATGGTACAGGCAGAATGCTGAGTACAGAAATTTGTTTTAATTCTTCAGCAGACTTGTGA 975 0.4072 MGSANGLISAEGKQPLFSFGLISDVQYADIPDGRSFLGVPRYYRHSIRVLQRAVKDWNTNKNHKFVINFGDIVDGYCPKDQSLITVKKIVDEFEMFNGPVYHLIGNHCLYNLPRSKLLPLLKIRSFGSHAYYDFSPVPEYRFVVLDGYDISAIGWPQDHPKTLEALKFLREKNPNDDKNSPTGLVGLERRFLMFNGAVGKEQIEWLGSVLQEATKLKQKIVICCHMPLDPAASSNEALLWNYDEVMNLIRRYTCVKLCLSGHDHKGGYSIDSHGIHHRVLEAALECPAGTDAFGYAEVFDDRISLYGTGRMLSTEICFNSSADL* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01171 324 CDD MPP_Nbla03831 17 305 IPR041869 -
Lapu3g01171 324 PANTHER - 10 319 - -
Lapu3g01171 324 Gene3D - 12 311 IPR029052 -
Lapu3g01171 324 SUPERFAMILY Metallo-dependent phosphatases 15 311 IPR029052 -
Lapu3g01171 324 Pfam Calcineurin-like phosphoesterase 18 265 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01171 Lapu-Chr3 12629660 12630636 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01171 K01517 - gmx:100808714 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01171 3 12629660 12630636 Lapu3g01171 3 12629660 12630636 ECH