Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01166 ATGGACTTCGACTTCAGGGCTAGTTTTCATTCTGTCAAACACATCTCTGCTGTGCAAGCTGCTAGACTTCACTCTGATAATTACTCAGTGATCCATTACACAGATGTGGATAATGATGGAAGGTGCGATTTCCGATGTCCATTTTGTGATTTTGAAATTGAAGTTCCTCTACTCTGCACCAATTTGGAAGATGATCATTGCTATGCCCTAAAAAATGTGGTTTGTCCCGTCTGTGAAGAAAATTTAGGGAAGGATGCAATCATGCAATTTACACATTCAAACTCTCGAAGGTGGGCGTGGAAGCCTGAGAAATCTACCATCTGGTCTGGTAACGCAGCAATGCTTGGCAAGAAGTTGGCTACCAGGGGGAACAAACAAGAATTATTAACTGATCAACTTTTGACACCATTCATCTGCAACCCTATTTCAAACTTTAACGATGTCCATCCAGATGAAAACTCCAGCTCCAGCCGCAAGGATATAAACGTTCCTGTTGCAAAAAGGTCTGGCACAAATGAAGCAGATATAGGTGATGAGCAGGATCAGGAAGAGAAAAGGCTGAGGGCAGCTTTTGTTCAGCAGTTGTTGTTCTCAACTATATTGGAGTAA 609 0.422 MDFDFRASFHSVKHISAVQAARLHSDNYSVIHYTDVDNDGRCDFRCPFCDFEIEVPLLCTNLEDDHCYALKNVVCPVCEENLGKDAIMQFTHSNSRRWAWKPEKSTIWSGNAAMLGKKLATRGNKQELLTDQLLTPFICNPISNFNDVHPDENSSSSRKDINVPVAKRSGTNEADIGDEQDQEEKRLRAAFVQQLLFSTILE* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01166 202 Pfam Stress-induced protein Di19, C-terminal 124 200 IPR027935 -
Lapu3g01166 202 MobiDBLite consensus disorder prediction 149 182 - -
Lapu3g01166 202 PANTHER PROTEIN DEHYDRATION-INDUCED 19 34 201 IPR033347 -
Lapu3g01166 202 Pfam Drought induced 19 protein (Di19), zinc-binding 43 92 IPR008598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01166 Lapu-Chr3 12598892 12605452 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01166 - - vun:114175178 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01166 3 12598892 12605452 Lapu3g01166 3 12598892 12605452 ECH