Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01158 ATGACAAGCAGCACCACTTCACTTGCTGCTATTCTAAAACTTCTCATCATTTTCTTATTCGCAGGTTGGGTTTCTCTTTGGCTTCTCAAGCCCACCCAAATATGGACAAGAAAATGGAAACAATTAGAAGATAGCGCCGATAATACAATTTTTGGATACTATGGTCTTAGCTTCGCTGTGTACACGTTTCCTATAATTGCTATTGCAATAATTGGACTTCTTTTATTGGATTTAAAAGGTGGATATCAAAGCAGAACCGCAAGAAGGCTATCAAAATCAAACTTCTTCTCAAATCCGCTGGTGGTGAACAGCACACTGGGAATCTTATCCAGCATTGAAATACTGGTAGCTTTCCTTTTTGTTGTCTTCCTAGCATGGACCTACTACTCTCGTATTTCTGCAGACTTCAGAAAGTTGATGCCATACAAATCACTGAAGTTGAATACATGGCAACTCAAGTATCACAGAGTAGCAACCCGGTTTGGCTTGCTATCAGAAGCTTGCCTGGCTTTGTTGCTCCTTCCCATTTTAAGAGGGTTGGCTGTGTTTCGCATCCTTGGCATTCAGTTTGAAGCTTCAGTAAGATATCACACCTGGGTCGGAACTGCAATGATACTTTTTGCTACAATACATGGTGCAAGCACTTTGCTGGTATGGGGGGTCAGCCACCATATTCAGGATGAGATTTGGAAGTGGCAAAAGACTGGACGCATATACCTCGCTGGGGAGATTACACTTGTTGTGGGGCTAGTCATTTGGGTCACTTCTCTACCCCAAATTAGAAGGAGAAAGTTTGAAATCTTCTACTACACACATCATTTATATGCAGTCTTTCTAGTATTTTTCTTGTTTCACGGTGGGGATAGACACTTTTATACGGTTTTCCCAGGAATATTCCTTTTTACCCTTGATAAATTGATCCGAATCATACAATCAAGTCCAAAAACTTGCATGGTTTCAGCTAAAATTTTTCCTGGCAAAGCTGTGGAGCTAATTCTGCCCAAGGATCCAGGGCTGAAATATAACCCTACAAGTGTTATATTTTTGAAAATACCAACCATATCTCATCTTCAATGGCACTCTTTCAGTATAATATCTAGTTCCAGGGCTGATGACCACATTTTGTCAGTGATAATAAAATGCGAAGGGTGGTGGACTAATTCTCTTTATGACCTGATACATGCTGAATTAGACAAAACTGAAGATAAAAGGAAGGGAATACCTGTTGCAATCGAAGGACCTTATGGACCTGCTTTTTTAGACTTTTTGAGATATGACACCCTTCTTCTTGTTGCTGGAGGAAGTGGAATAACCCCATTTATGAGCATTTTGACAGAAGCTAATTCAGCTACAAGCAAAAGTAGATTTCCCTCGAGAATACAACTTGTGTATGTCACCAAGAAAGCACAAGACTTCTGTCTGTTACATTCAGTCTCACATTTGTTACTCAACCAATCAACTGAAAGTTTTCATTTGAACCTAAAGCTGTTTGTAACCCGAGAAACACAAGCAGGGGTAGGGATTAGGGAGCTTCTAAACGAGTTCTTTAAAGTAAGAACCCTGCAATTGAACAGCGTTTGTTCAAATTATGCAGCATACGGGCCTGAAAGTCCGTCTTGGATGGCTGCTATTGCAGGATTTTGCTCCATTACTTTTCTTATTTTCCTAATCTGTTTAAACCATATTATAATTCCATCTGGAAAGCGCTCCAAAATGGACAAAGAGAAGACTCCCTCTTGGGTTGTGGATCTTCTTCTGATAGCTGCTTTTGTACTAGCTTTAGCCTGCAGTGCCTCGGTGGCAGCTCTTTTGAGATGGAGAAGGCTGAGGAAAGGGGTTCCCAAAATATCGAATAGAGAAATGGAACCCCTTGATCTAAGTTCAGCTGAAGCTAGGAACGCACTTGAAGCACATGAAGTGCATTTTGGAGGAAGGCCTAACTTTAAAGAAATATTTGGCAAGCTCCGAAATGAAAGCGGTGGATCTAATATTGGAGTATTGGTTTGTGGACCAGAGAGCATGAAGGAATCGGTGGCGTTCGCATGCCAGCAGGAATCCGAGTGTTTTAAGATAAGTGCGAAGAGAACAGAATCCTGCTTCACTTTCCACAATCTCAACTTCACGCTGTAG 2130 0.4113 MTSSTTSLAAILKLLIIFLFAGWVSLWLLKPTQIWTRKWKQLEDSADNTIFGYYGLSFAVYTFPIIAIAIIGLLLLDLKGGYQSRTARRLSKSNFFSNPLVVNSTLGILSSIEILVAFLFVVFLAWTYYSRISADFRKLMPYKSLKLNTWQLKYHRVATRFGLLSEACLALLLLPILRGLAVFRILGIQFEASVRYHTWVGTAMILFATIHGASTLLVWGVSHHIQDEIWKWQKTGRIYLAGEITLVVGLVIWVTSLPQIRRRKFEIFYYTHHLYAVFLVFFLFHGGDRHFYTVFPGIFLFTLDKLIRIIQSSPKTCMVSAKIFPGKAVELILPKDPGLKYNPTSVIFLKIPTISHLQWHSFSIISSSRADDHILSVIIKCEGWWTNSLYDLIHAELDKTEDKRKGIPVAIEGPYGPAFLDFLRYDTLLLVAGGSGITPFMSILTEANSATSKSRFPSRIQLVYVTKKAQDFCLLHSVSHLLLNQSTESFHLNLKLFVTRETQAGVGIRELLNEFFKVRTLQLNSVCSNYAAYGPESPSWMAAIAGFCSITFLIFLICLNHIIIPSGKRSKMDKEKTPSWVVDLLLIAAFVLALACSASVAALLRWRRLRKGVPKISNREMEPLDLSSAEARNALEAHEVHFGGRPNFKEIFGKLRNESGGSNIGVLVCGPESMKESVAFACQQESECFKISAKRTESCFTFHNLNFTL* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01158 709 Gene3D - 409 536 IPR039261 -
Lapu3g01158 709 Gene3D - 599 707 IPR039261 -
Lapu3g01158 709 SUPERFAMILY Riboflavin synthase domain-like 320 419 IPR017938 -
Lapu3g01158 709 SFLD Ferric Reductase Domain 32 686 - -
Lapu3g01158 709 SFLD Ferric reductase subgroup (FRE) 10 686 - -
Lapu3g01158 709 PANTHER NADPH OXIDASE 15 707 - -
Lapu3g01158 709 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 296 421 IPR017927 GO:0016491
Lapu3g01158 709 CDD NOX_Duox_like_FAD_NADP 319 472 - -
Lapu3g01158 709 Pfam Ferric reductase like transmembrane component 162 282 IPR013130 -
Lapu3g01158 709 Pfam Ferric reductase NAD binding domain 425 683 IPR013121 GO:0016491
Lapu3g01158 709 Pfam FAD-binding domain 319 417 IPR013112 GO:0016491
Lapu3g01158 709 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 409 522 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01158 Lapu-Chr3 12523426 12526749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01158 182 709 Miscellaneous Gene Families AT5G50160 47.740 9.38e-179 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01158 K00521 - gmx:100816560 1238.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01158 3 12523426 12526749 Lapu3g01158 3 12523426 12526749 ECH