Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01149 ATGTCAACTTTATTTGTAATAATGAAAAATGATGATGGTGACCCAATAATGTATGAAAGATTTTGGCGACAAATGGGTGACAAGACCACAATCACAATTCCAGGATGGCAATCCATGAGTTATTTATCTGATGTCTCAAGCATTTGCTGGTTTTTGGAACCTGAGTTTGCAACGGAAGTAGTGAGGTTGCATAAAGTGGTGGGCAATGCTGTGACAGAAGGTCGCCATATTGTTGTTGGGACAGGTTCCTCTCAGCTAATTCTGGCTGCCCTTTATGCTCTGTCCTCGCCTGATGCTGCTGAACCAATCAGCGTTGTATCTGCCGCGCCCTATTATTCGTCCTACCCATCAATGGCAGATTACCAGAAATCAGGCCTTTACCAGTGGGCTGGTGACACACAGAATTTTGACAAAGAGGGTCCTTACATTGAGCTGGTTACTTCTCCCAATAACCCTGATGGATATAGAAGGAAATCAAAAGTCAACCGAAGCCAGGGACTCTTGATTCATGACCTTGCCTATTATTGGCCGCAATACACTCCAATATCATCCCCTTCAGATCATGATCTCACGCTTTTCACTGCCTCAAAAAGTACTGGTCATGCAGGAATGCGCATAGGGTGGGCTCTTGTGAAAGATAAAGAGGTAGCAAAGAAAATGACTAAATTCATAGAGCTAAACACAATTGGTGTGTCGAAGGATTCTCAACTCAGAGCTGCCAAGGTTTTAAAGGCAGTGTCTGAGAGCTGCGGACAAAAAAAACACCAAAACGGGCAATCCTTTTTCGATTACAGCTACAACCTCATGGCACGAAGGTGGAAGCAACTGAGGGAAGTAGTTGATGCGGGTGATATGTTCTCTTTGCCCCAATTTTCTCCCGCATTCTGCACCTTCTTTGGTAAGGAGACGGAGCCTCAACCAGCTTTCGTGTGGTTGAAGTGCGAGGGAGATGTTGAGGACTGCGAGACCTTCCTTCGAGGACACAAAATTATAACAAGAAGTGGGAGACAGTTTGGGGCTAGCCCAAAATATGTAAGAATCAGCATGTTGGATACAGATGAAACTTTTATACAGTTAATAGAGAGACTGTCAAACATACAGGAGCGAGAATGA 1113 0.4429 MSTLFVIMKNDDGDPIMYERFWRQMGDKTTITIPGWQSMSYLSDVSSICWFLEPEFATEVVRLHKVVGNAVTEGRHIVVGTGSSQLILAALYALSSPDAAEPISVVSAAPYYSSYPSMADYQKSGLYQWAGDTQNFDKEGPYIELVTSPNNPDGYRRKSKVNRSQGLLIHDLAYYWPQYTPISSPSDHDLTLFTASKSTGHAGMRIGWALVKDKEVAKKMTKFIELNTIGVSKDSQLRAAKVLKAVSESCGQKKHQNGQSFFDYSYNLMARRWKQLREVVDAGDMFSLPQFSPAFCTFFGKETEPQPAFVWLKCEGDVEDCETFLRGHKIITRSGRQFGASPKYVRISMLDTDETFIQLIERLSNIQERE* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01149 370 Pfam Allinase 11 366 IPR006948 GO:0016846
Lapu3g01149 370 CDD AAT_like 54 363 - -
Lapu3g01149 370 Gene3D - 53 256 IPR015421 GO:0003824
Lapu3g01149 370 SUPERFAMILY PLP-dependent transferases 8 366 IPR015424 -
Lapu3g01149 370 Gene3D - 5 48 IPR037029 GO:0016846
Lapu3g01149 370 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 26 365 - -
Lapu3g01149 370 Gene3D Aspartate Aminotransferase, domain 1 259 367 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01149 Lapu-Chr3 12390690 12395878 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01149 K16903 - gmx:100777098 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01149 3 12390690 12395878 Lapu3g01149 3 12390690 12395878 ECH