Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01146 TTGGAAGAGAAAAAAAGTAAACCAATTGGCGGATTCAAAAGCCAAGATAAGGATTTGCAGGGAAGAGAGATGGCTTCCCCAATTTCAATCTCCGACGCAGAGATCCGTCTTCAAACGCAAAAAATCGACGCTTTCACCGCTTCTTTCGCCGAATCTCTCCATTCCCTCCTACCCATAGCGCAAGAAACTGCTCGCTGTCAAGTTCAACTAGACGAGGCTAAAGCTAAACTGAGAGACACCGAGGATGATTTGGTCAAATCACTTGCAGTCAAGGCTCGCAAAGAGGCCAAGCGAATGGCTTTGATGGATGCTTTTGCCTCTGCAAAGGCTAGAGTTGAAAACCTCAACGCAAGTATTCAAGAACGTCGTACCAAAAGCCAAGAATATGCTGCAGTTATATCTCAACAATCTCTTGCTTTGGCTGCATCTGAAGGGAAATTAAATGAAAGTGTTGAACAGAAAGATGAAACACAAGAGGTCGTTTCCTGGTACAATAGGGTCCTTGGTTTTCATGTAAAAGGCGGACGTGGGGTAAAATTCACATTCAAGAATATAAATATAAACAATCCAACTGAGGAGTACATTTTTACTATCTTCCATAAAAAAGATACATACTCATTATTAAGCTGTGAACCTTCCCTCAGTGAAACCGAAGTGTTGATCCTTGAATTAAACAAGACAAATGATCTATTTAAATTTGTCAGAGTAATGAGGAAAAAGTTCCAAGAAGCAGTGGCACAAGCAGGTGAACATGAACAGTCTACTTTTAACTCCGCATCTGCTCCCGTTTTGTCAATGTCATCTGTTAGAAGTGATTTTCTGGGCAAGGAAAATGAGCATCAAGTTGAACCTACAGAAGGTAATACAAAAGTAACAAAAAAATATGTTCACAGAAGGCTAAAAGCAGTTTTATCTCCTGGATCAGCATCATCTGTTCGCCAGTCTCCTCGTTTGAAGACTAGGAAAGAAAGTCGAGGGGAGGATGCTATCCAAGCCACGTAA 1002 0.4122 LEEKKSKPIGGFKSQDKDLQGREMASPISISDAEIRLQTQKIDAFTASFAESLHSLLPIAQETARCQVQLDEAKAKLRDTEDDLVKSLAVKARKEAKRMALMDAFASAKARVENLNASIQERRTKSQEYAAVISQQSLALAASEGKLNESVEQKDETQEVVSWYNRVLGFHVKGGRGVKFTFKNININNPTEEYIFTIFHKKDTYSLLSCEPSLSETEVLILELNKTNDLFKFVRVMRKKFQEAVAQAGEHEQSTFNSASAPVLSMSSVRSDFLGKENEHQVEPTEGNTKVTKKYVHRRLKAVLSPGSASSVRQSPRLKTRKESRGEDAIQAT* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01146 333 Pfam Chromosome segregation protein Spc25 174 242 IPR013255 GO:0007059|GO:0031262
Lapu3g01146 333 Gene3D Chromosome segregation protein Spc25 149 249 - -
Lapu3g01146 333 MobiDBLite consensus disorder prediction 316 333 - -
Lapu3g01146 333 MobiDBLite consensus disorder prediction 1 20 - -
Lapu3g01146 333 MobiDBLite consensus disorder prediction 304 333 - -
Lapu3g01146 333 PANTHER KINETOCHORE PROTEIN SPC25-RELATED 24 290 IPR045143 GO:0007059|GO:0031262
Lapu3g01146 333 Coils Coil 63 90 - -
Lapu3g01146 333 MobiDBLite consensus disorder prediction 1 23 - -
Lapu3g01146 333 FunFam Probable kinetochore protein spc25 149 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01146 Lapu-Chr3 12357459 12362491 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01146 K11550 - gmx:100776032 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01146 3 12357459 12362491 Lapu3g01146 3 12357459 12362491 ECH