Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01144 ATGGACATGAAGGGATATTCAGTTTCCTGGACAAAACATAAGAAAGAGCCATATTTTGCTGCACATCGCACAAGAAGACAACAACAATGCATACAAGCAAATCATGATACCCCAGAAGAAACAAGTTCACTAAATCATTCCCTGAAATTGGCTGTTTCCACTTCCCAAAATACTCTACTGCCTACGCTACCTGCCTTTGTTGCTTTGCTCCTACTTGTTACTTCAATTGGCACAGCATTTTCTCACCCCATTGCCTCCAATTCACCTTTGCCAGCACACTCCCACCCCAGTGCTAACCACACTTTGAGACCAGCTGCAGTGTTGCAAAAGTTGAGGAGAATCAGAGCTCACCTCAACAAGATTAACAAGCCTCCTGTTAAAACAATCAAGAGTCCAGATGGGGATTTGATAGATTGTGTTTTATCTCATCAGCAACCTGCTTTTGACCACCCTCTGCTCAGAGGGCAAAGACCATTGGATCCACCAGAAAGGCCAAAGGGCCACCCCAATGGAGAAACAGGAATAGAAAGCTTTCAGCTTTGGTCCGATTCTGGTGAAATATGCCCTGAAGGAACAGTTCCAATCAGAAGAACAACTGAACAAGATTTTCTACGAGCAAGCTCTATCAGAAGATTTGGAAGAAAAGTACGAAGGGACTCAACTGGCACTGGTCATGAGCACGCAGTAGTTTTTGTAAACGGAGATCAATACTTTGGAGCAAAAGCAAACATAAACGTGTGGACACCCAGCGTAACCGATCCATACGAATTCAGTTTGTCACAGATATGGGTTATCGCTGGATCTTTTGGCAATGATCTGAATACCATAGAGGCTGGATGGCAAGTAAGTCCCGAGCTATATGGAGACAACTATCCTAGGTTCTTCACTTATTGGACAACGGATGCATATCAAGCAACAGGATGCTACAATTTACTATGTTCAGGATTTGTCCAAACTAACAACAGGATAGCAATAGGGGCGGCAATCTCACCAAGATCCATCTTTAATGCCAGACAATTTGATATTGGCTTAATGGTTTGGAAGGACCCAAAGCATGGACATTGGTGGCTGGAATTTGGGTCGGGGCTACTTGTTGGGTACTGGCCAGCATACTTGTTTAGTCACTTGAGAAACCATGCTAGCATGGTACAATTTGGAGGAGAAATTGTGAATTCTCGTTCAAGGGGCTACCACACTGGCACTCAAATGGGTAGTGGCCATTTTGCAGAAGAAGGGTTTAGAAAAGCAGCCTATTTTAGAAACTTACAAGTTGTTGATTGGGACAACAACTTGCTTCCTCTTTCCAATATTCACCAATTGGCTGACCATTCCAATTGCTATGACATAAGGGTGGGATCAAACAATGTTTGGGGAACTTACTTTTATTATGGAGGTCCTGGAAGAAATGTGAGATGTCCATGA 1422 0.4339 MDMKGYSVSWTKHKKEPYFAAHRTRRQQQCIQANHDTPEETSSLNHSLKLAVSTSQNTLLPTLPAFVALLLLVTSIGTAFSHPIASNSPLPAHSHPSANHTLRPAAVLQKLRRIRAHLNKINKPPVKTIKSPDGDLIDCVLSHQQPAFDHPLLRGQRPLDPPERPKGHPNGETGIESFQLWSDSGEICPEGTVPIRRTTEQDFLRASSIRRFGRKVRRDSTGTGHEHAVVFVNGDQYFGAKANINVWTPSVTDPYEFSLSQIWVIAGSFGNDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPRSIFNARQFDIGLMVWKDPKHGHWWLEFGSGLLVGYWPAYLFSHLRNHASMVQFGGEIVNSRSRGYHTGTQMGSGHFAEEGFRKAAYFRNLQVVDWDNNLLPLSNIHQLADHSNCYDIRVGSNNVWGTYFYYGGPGRNVRCP* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01144 473 MobiDBLite consensus disorder prediction 156 170 - -
Lapu3g01144 473 FunFam Putative carboxyl-terminal proteinase 246 365 - -
Lapu3g01144 473 Pfam Neprosin activation peptide 128 230 IPR025521 -
Lapu3g01144 473 Gene3D - 250 359 - -
Lapu3g01144 473 MobiDBLite consensus disorder prediction 150 173 - -
Lapu3g01144 473 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 112 469 - -
Lapu3g01144 473 Pfam Neprosin 256 466 IPR004314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01144 Lapu-Chr3 12319533 12322713 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01144 - - gmx:100782442 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01144 3 12319533 12322713 Lapu3g01144 3 12319533 12322713 ECH