Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01141 ATGACGTTGATGCGTACTCTGTATCCAACCGTGGCTGTTCCTATTCCTCTCTCAAACCTTTCCGTTAGGAACAATTTCCCTGTTCGATGCAGTAACCTTCACTCGCAACCGCAACTCGACTCGCGCAAGTTAGTTCTTTCTGTGAAGGAAAAGCTTGAAAAAGAACACCATGGCCTCCCTGTTGGAAGAAATGGAAGGGATGACGAAGATATGATACTGTGGTTTCTCAAAGATCGCAAGTTTTCTGTTGAAGAGGCTGTTTCCAAGTTGACTAAAGCCATTGTCCAAGGTCTTTTGAGTTTGGCTAACACTCCAGCAAGGTTGACACACCATGGCGATGGGTGTATACCTAAATGGCGTCAAGATTTTGAGGTGTCTAAATTGACCGATGAAACTGTTAAAGATGCTGCTCAAACCGGAAAAGGATATGTACACGATTTTCTAGATATCAATGACAGACCTGTGCTTGTGGTGGTTGGATCAAAGCATATTCCTATGGCACTGGACCCTGCAGAGGATGAGAGGCTGTGTGTTTTCTTAATTGAGAAGGCCTTGAGTAAGCTTCCAACTGGGAAAGAACAAATTCTTGGAATAGTTGATCTCAGAGGTTTCAGAACAGAAAATGCTGATCTTAAATTCTTGACATTCTTGTTTGATGTATTCTATTGTTACTATCCCAAGCGATTGGATCAAGTACTATTTGTTGATGCACCTTTTGTTTTTAAGCCCATTTGGCAGCTTGTCAAGCCCTTGTTAAAATCATATGCTTCTCTGGTGAGATTTTGCTCTGCAGAGACTGTTAGAAAGGAATACTTTACAGACGAAACTTTGCCACCAAACTTTAGAGACTGA 852 0.419 MTLMRTLYPTVAVPIPLSNLSVRNNFPVRCSNLHSQPQLDSRKLVLSVKEKLEKEHHGLPVGRNGRDDEDMILWFLKDRKFSVEEAVSKLTKAIVQGLLSLANTPARLTHHGDGCIPKWRQDFEVSKLTDETVKDAAQTGKGYVHDFLDINDRPVLVVVGSKHIPMALDPAEDERLCVFLIEKALSKLPTGKEQILGIVDLRGFRTENADLKFLTFLFDVFYCYYPKRLDQVLFVDAPFVFKPIWQLVKPLLKSYASLVRFCSAETVRKEYFTDETLPPNFRD* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01141 283 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 132 283 IPR001251 -
Lapu3g01141 283 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 13 94 - -
Lapu3g01141 283 Gene3D - 36 282 IPR036865 -
Lapu3g01141 283 SUPERFAMILY CRAL/TRIO domain 131 271 IPR036865 -
Lapu3g01141 283 CDD SEC14 134 281 IPR001251 -
Lapu3g01141 283 SUPERFAMILY CRAL/TRIO N-terminal domain 44 93 IPR036273 -
Lapu3g01141 283 SMART sec14_4 136 281 IPR001251 -
Lapu3g01141 283 Pfam CRAL/TRIO domain 138 278 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01141 Lapu-Chr3 12286840 12290744 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01141 - - vun:114175521 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01141 3 12286840 12290744 Lapu3g01141 3 12286840 12290744 ECH