Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01140 ATGAAGAAGGGAGTAACAGTATTAATCCTAGCAGTAAAAGCGATATGTTTGGTTATGGTTAACAGTGCGATGGAGTCCCCACAGTACAGTGTGGTACACTCGCAGTCCGATTTCGAGATCCGGCTCTATGGAACCTCCGTTTGGATGTCTGCTCCTGCTCTCGACCTTTCCTTCGAGAAAGCCTCCTGGGAAGGTTTCCACAGGTTGTTCCAGTTCAGAGAAGGCGCCAACCTCAATTTCTCACGAATCCCAATGACCATCCCTGTCTTGACCACCACCGTCCCGGAAGCCGGTCCCCTTCACTCCCAAGGCTACTACGTCAGTTTATACTTACCCGCTAAGTTCCAAGCTAACCCACCAGTGCCGCTTCCAGAACTCAATATCAGGCCCTACGAATTCACCACCCACTGCGTTGCGGTTAGAAAGTTCTCTGGATTCGCCAAGGATGAGAGGATTGTCAAAGAGGCGGAAAAGCTTGCCACCAGCCTCAGTACCTCTCCCTGGGCTCAGTCCAAGACTCGTCGTGGTTACTCGATCGCGCAGTACAATTCTCCCATGCAAATTGTGAAGCGCAAAAACGAGGTGTGGGTAGACATTGATGCTCCTGAATTAGGCTGTGAATCGGTTGATGCTGCCGCGTATTGA 645 0.5101 MKKGVTVLILAVKAICLVMVNSAMESPQYSVVHSQSDFEIRLYGTSVWMSAPALDLSFEKASWEGFHRLFQFREGANLNFSRIPMTIPVLTTTVPEAGPLHSQGYYVSLYLPAKFQANPPVPLPELNIRPYEFTTHCVAVRKFSGFAKDERIVKEAEKLATSLSTSPWAQSKTRRGYSIAQYNSPMQIVKRKNEVWVDIDAPELGCESVDAAAY* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01140 214 Gene3D Regulatory factor, effector binding domain 23 203 IPR011256 -
Lapu3g01140 214 SUPERFAMILY Probable bacterial effector-binding domain 15 199 IPR011256 -
Lapu3g01140 214 PANTHER HEME-BINDING PROTEIN-RELATED 22 198 IPR006917 -
Lapu3g01140 214 FunFam Heme-binding protein 2 24 204 - -
Lapu3g01140 214 Pfam SOUL heme-binding protein 25 197 IPR006917 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01140 Lapu-Chr3 12280816 12283839 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01140 - - gmx:100306073 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01140 3 12280816 12283839 Lapu3g01140 3 12280816 12283839 ECH