Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01136 ATGAAACCCATACCTGTCAGACATTCTGCAATGGGTTCCATTTGGATGTGCCATTTCTTTCTGTTACTGTCCATACTAGATACTTCTTTTATTTCAACTATGGCCAATAATGCAACAGATTCCTACTGGCTTCTCAGAATTAAATCAGAATTGGTAGATCCATTAGGAGCACTTGGCAACTGGTCTCCAACAACTCATGTCTGCAACTGGGATAGAATAACATGTGCAGTAGATCAGGAACATGTTATTGGCCTGAATCTGTCGGGTTCAGGAATATCCGGTTCCATTTCAGTTGAGTTCAGTCTCCTCTCTTCTCTTCTAACACTTGATTTGTCTTCAAATTCTCTTTCTGGCGCCATCCCTTCGGAGCTGGGTCAGCTTCAAACTCTAAGAATATTGCAACTATACTCAAATGATCTCTCTGGGAACATTCCTGCAGAGATTGGTAACATGAGGAAGTTGCAAATTCTTAGAATAGGAGACAACAAGTTGACAGGTGAAATTCCACCTAGTATTGCCAATATGAGTGAATTGACAGTTTTGGCAGCAGGATACTGCCACTTGAATGGAAGCATACCAGTTGGAATTGGTAAATTGAAGCATCTAATGTCTCTTGATTTAGAAATGAACAGCCTTAGTGGCCCCATACCTGAAGAGATTGAAGGCTGTGAAGAGCTCCAAAACTTCGCAGCGTCAAACAACATGCTTGATGGAGACATACCTTTCTCTATGGGGTCTCTTAAATCATTGAAAATTCTGAACCTGGCCAATAACAGTTTATCTGGATCAATTCCTACAGCTTTGAGTCATCTTTCTAACTTGACATACCTGAATTTGCTTGGAAACAAACTACATGGAGAAATTCCTTCTGAGCTTAATAATCTGATTCAGCTGCAGAAGCTAGACTTGTCCAGAAACAACCTCTCTGGATCAATACCTTTCCTTAATGTAAAATTGCGGAGTCTTGAAACTCTTGTTCTGTCTGATAATGCTCTGACAGGTAGCATTCCAAGTAACTTCTGCCTCAGAGGTTCAGAGCTTAAGCAACTTTTTTTGGCTAGAAACATGCTCTCTGGCAAGTTTCCTTTGGAGTTACTCAACTGCCCCTCAATCCAACAGTTGGACCTTTCTGATAACAGTTTTGAAGGAGAACTTCCAGCAAGCCTGGACAAACTGAAGAACCTCACGGATCTTGTTCTCAACAACAACAGCTTTGTTGGATCTCTACCTCCTGCAATTGGGAACATTAGTAGCTTAGAGGGTCTTTTCCTATTTGGTAACTTCTTCACAGGTAAAATTCCAATGGAGATTGGAAAGCTGCAGAGGTTGAGCACCATTTACCTATATGACAACCAAATGTCTGGACTAATACCAAGAGAGATAACAAACTGCACAAGCTTAGAGGAAATTGACTTCTTTGGTAATCACTTCACAGGGCCCATTCCAGAGACTATAGGCAAGCTTAAGAACTTAGTTGTTCTGCATCTTAGGCAGAATGACTTGTCTGGTCCGATCCCACCAAGCATGGGGTACTGTAAAAGCCTTCAGATCTTGGCCTTAGCAGATAACATGTTGTCTGGTTCCATTCCACCTACGTTCAGTTACCTCTCGGAACTCACTAAAATTACCCTTTATAACAACTCCTTTGAAGGACCTCTCCCTTATTCACTCTCTTCTCTCAAAAGCCTCAAAATCATAAACTTTTCACACAACAAGTTCAGTGGAAGTTTCTTTCCTCTCACTGCTTCAAATTCTCTTACAATTCTGGATTTGACCAACAACAGCTTCTCAGGTCCCATCCCTTCCACTCTAGCCAATTCTAGAAACCTCAGCCGTCTCAGACTTGGACAAAATTATCTCACAGGAAGCATTCCTTCTGAATTTGACCAACTCACTGAGCTCAACTTTCTTGATTTATCATTCAACAATTTAACAGGAGAGATGCCACCTCAACTCTCAAACTCCAAGAAAATGGAACACATCCTGATGAATAACAACAGGTTGAGTGGCAAATTACCTGTTTGGTTGGGAAGCTTACAAGAACTTGGTGAGCTAGATCTCTCGTACAATAACTTCAGTGGGAGGGTACCTTCTGAGCTTGGTAACTGCTCAAAATTGCTCAAGCTTTCTCTCCATCACAACAATCTCTCTGGTGAAATCCCCCAAGAGCTAGGAAACCTCACTGCCCTCAATGTCTTCAATTTGCAAAGGAACGGATTCTCTGGCCCCATTCCTCCAACAATTCAGCAATGCTCAAAACTGTATGAGCTTAGGCTCTCAGAGAACTTTTTAACAGGTACCATACCTGTTGAGCTAGGAGGGCTTGCTGAGTTGCAAGTGATATTGGACTTGAGTAAAAATCTCTTCACTGGTGAGATTCCACCATCTCTGGGAAACCTCATGAAGCTAGAGAGACTAAACCTCTCTTCGAACCAACTTGAAGGAAAAGTTCCTCCTTCACTCGGCAAACTCACAAGCCTGCACGTGTTGAATCTCTCAAGCAATCATCTTGAAGGCCAGATTCCTCCAACATTTTCAGGATTCCCACTAAGCTCATTCCTGAACAATAAGGGCTTGTGTGGCCCACCACAGAGATCATGCTCAGAATCCACGGCACAGGGGAAAATGCAGCTATCAAACACACAAGTGGCAGCGATCATTGTGGCCATTGTCTTTACTTCCACATTGATATGCTTAGTGATGTTGTACATCATGCTCAGGATCTGGTGCAACTGGAGAAAAGTGGCCATTTCAAGTGCAGAAGGTGGCACTGTTGCCCACAAGGCAAGGAATGGAGAGTATTGGAATATGAATTCATTTGGGTTGATTCCTTCACCAGATAAGCAGAATTCAGCAACAACAACTTCCTTCTATAATCTCAAAATGGAAACTACGGAAAATACACATATGTAA 2913 0.4216 MKPIPVRHSAMGSIWMCHFFLLLSILDTSFISTMANNATDSYWLLRIKSELVDPLGALGNWSPTTHVCNWDRITCAVDQEHVIGLNLSGSGISGSISVEFSLLSSLLTLDLSSNSLSGAIPSELGQLQTLRILQLYSNDLSGNIPAEIGNMRKLQILRIGDNKLTGEIPPSIANMSELTVLAAGYCHLNGSIPVGIGKLKHLMSLDLEMNSLSGPIPEEIEGCEELQNFAASNNMLDGDIPFSMGSLKSLKILNLANNSLSGSIPTALSHLSNLTYLNLLGNKLHGEIPSELNNLIQLQKLDLSRNNLSGSIPFLNVKLRSLETLVLSDNALTGSIPSNFCLRGSELKQLFLARNMLSGKFPLELLNCPSIQQLDLSDNSFEGELPASLDKLKNLTDLVLNNNSFVGSLPPAIGNISSLEGLFLFGNFFTGKIPMEIGKLQRLSTIYLYDNQMSGLIPREITNCTSLEEIDFFGNHFTGPIPETIGKLKNLVVLHLRQNDLSGPIPPSMGYCKSLQILALADNMLSGSIPPTFSYLSELTKITLYNNSFEGPLPYSLSSLKSLKIINFSHNKFSGSFFPLTASNSLTILDLTNNSFSGPIPSTLANSRNLSRLRLGQNYLTGSIPSEFDQLTELNFLDLSFNNLTGEMPPQLSNSKKMEHILMNNNRLSGKLPVWLGSLQELGELDLSYNNFSGRVPSELGNCSKLLKLSLHHNNLSGEIPQELGNLTALNVFNLQRNGFSGPIPPTIQQCSKLYELRLSENFLTGTIPVELGGLAELQVILDLSKNLFTGEIPPSLGNLMKLERLNLSSNQLEGKVPPSLGKLTSLHVLNLSSNHLEGQIPPTFSGFPLSSFLNNKGLCGPPQRSCSESTAQGKMQLSNTQVAAIIVAIVFTSTLICLVMLYIMLRIWCNWRKVAISSAEGGTVAHKARNGEYWNMNSFGLIPSPDKQNSATTTSFYNLKMETTENTHM* 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01136 970 PRINTS Leucine-rich repeat signature 298 311 - -
Lapu3g01136 970 PRINTS Leucine-rich repeat signature 824 837 - -
Lapu3g01136 970 PANTHER UNNAMED PRODUCT 18 539 - -
Lapu3g01136 970 FunFam Uncharacterized protein 194 288 - -
Lapu3g01136 970 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 579 871 - -
Lapu3g01136 970 Pfam Leucine rich repeat N-terminal domain 39 75 IPR013210 -
Lapu3g01136 970 Pfam Leucine Rich repeats (2 copies) 802 837 IPR025875 -
Lapu3g01136 970 FunFam Uncharacterized protein 386 481 - -
Lapu3g01136 970 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 37 193 - -
Lapu3g01136 970 Pfam Leucine Rich Repeat 249 271 IPR001611 GO:0005515
Lapu3g01136 970 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 289 385 - -
Lapu3g01136 970 Gene3D Ribonuclease Inhibitor 314 528 IPR032675 -
Lapu3g01136 970 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 482 578 - -
Lapu3g01136 970 SUPERFAMILY L domain-like 345 648 - -
Lapu3g01136 970 Pfam Leucine rich repeat 585 644 IPR001611 GO:0005515
Lapu3g01136 970 ProSiteProfiles Leucine-rich repeat profile. 297 319 IPR001611 GO:0005515
Lapu3g01136 970 Gene3D Ribonuclease Inhibitor 529 871 IPR032675 -
Lapu3g01136 970 SUPERFAMILY RNI-like 584 849 - -
Lapu3g01136 970 Gene3D Ribonuclease Inhibitor 192 313 IPR032675 -
Lapu3g01136 970 Gene3D Ribonuclease Inhibitor 37 191 IPR032675 -
Lapu3g01136 970 SUPERFAMILY RNI-like 85 406 - -
Lapu3g01136 970 SMART LRR_typ_2 103 127 IPR003591 -
Lapu3g01136 970 SMART LRR_typ_2 319 343 IPR003591 -
Lapu3g01136 970 SMART LRR_typ_2 151 175 IPR003591 -
Lapu3g01136 970 SMART LRR_typ_2 679 703 IPR003591 -
Lapu3g01136 970 SMART LRR_typ_2 247 270 IPR003591 -
Lapu3g01136 970 SMART LRR_typ_2 392 416 IPR003591 -
Lapu3g01136 970 SMART LRR_typ_2 824 847 IPR003591 -
Lapu3g01136 970 SMART LRR_typ_2 488 512 IPR003591 -
Lapu3g01136 970 SMART LRR_typ_2 295 316 IPR003591 -
Lapu3g01136 970 SMART LRR_typ_2 631 655 IPR003591 -
Lapu3g01136 970 SMART LRR_typ_2 199 223 IPR003591 -
Lapu3g01136 970 SMART LRR_typ_2 800 823 IPR003591 -
Lapu3g01136 970 SMART LRR_typ_2 560 585 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01136 Lapu-Chr3 12232436 12235470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01136 236 855 Receptor kinase-like Gene Family AT5G46330 35.313 2.42e-100 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01136 - - gmx:100779315 1660.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01136 3 12232436 12235470 Lapu3g01136 3 12232436 12235470 ECH