Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01132 ATGGCGAACGCGAGTGACGCTGGCGTCAAAGCCCTACGGCGGCTGAAAGCGACGGATCCACCGTCATGGCTGGCGCCGAACGCGGAGCTATCGGAAGCTGCTCGTACTGCGTCCCAATACTTGTTTTCCACTCTTAAACCATTTTCCCCTAAATCGCCATTGGACCAACTCCTTGTTGAAGGTTTCGACGCAGAACAAATATGGCAACAAATCGACCTACAATCACAGCCTCTGTTATCCACCCTGCGCCGCCGCTTGAAGCAGCTAGCTGAAAATCCAGAAGAGATTTCCCGGCTGAAGGTTCCTTCGGAAAGTGGGAACAAGGTGGAGAAAAAGAGTAAAGACAAATGGGAGGGAGATAGTGACGGTTTTGACGAGGAGTTGGATGAAGAAGATGAGGAGGAAGGAGACGAGGACGAAGAAAAGGAGGGGGAAGAAGAAGGAATGGAAGAGGAAGGGGAAGATGAAGAGGAAGATGAAGAGGAAGATGAAGAGGAAGACGAAAAGGAAGAGGAGAATGAAGAAGGTGGTGGCATTGAGGATAAATTCTTGAAAATAGATGAATTGGCGAAGTACTTAGATAAGGAGGAAGAGGATTTCGAGAATGGTGAGGGAGACAGAGAAGGTGAGGAAGAAAATGATGACGAGGAAAGTGAAGAGGATGATGATTTTGGGTTTGGTGACGAAGATGATGAAGGCGAAGAAGCAGAGGACATGGAAAGTGCAAGGTATGAAGACTTCTTTGGAGGTAAAAAGGAAAGGGGTTCAAAAAGAAAAGCTCAGGTACTTCAGGAATCTGAATATTCTGAAGATGAGGATGACATGGAATTTGACAAGCAGAAGAAAGGGACTGCATCTGCCCATGAAAAGCAGCTGGAAAAAATTCAATCCAAGATAGAGCAGATGGAGAAAGCTAACATAGAGCCCAAAGCATGGACTATGCAGGGTGAGGTAACTGCTGCAAAGAGACCCAAAAATAGTGCATTGGAAGTTGATCTAGACTTTGAGCACAATGTGAGGCCTGCTCCTGTAATCACTGAGGAAGTTACAGCTTCAATTGAGGATATGATCAAGAAAAGGATTATTGAGGGGCTTTTTAATGATGTTCAGAGGCTTCCTAAATTGCCGTCTAAAGCGCCTCGGGAAGTTAAAGAGTTGGATGACAATAAAAGCAAGCAGGGTCTTGCGGAGATTTACGAGCAAGAATATGTTCAGAAGACAGACCCCACATCTGCTCCATTGTCATTCAAAGATGAACAAAAGAATGAGGCTAGCATGCTGTTTAAGAGACTCTGTCTGAAGCTGGATGCCCTATCTCATTTTAACTTTGCCCCAAAACCTGTTATAGAGGACATGTCTATTCAAGCTAATGTGCCAGCTCTGGCAATGGAAGAAATTGCTCCTGTGGCTGTTTCAGATGCTGCTATGTTGGCTCCTGAGGAGGTGTTTGATGGCAAGGGTGATATTAAAGAAGAAGTAGAGCTTACACAGGCTGAAAGGAAAAGAAGGAGAGCTAACAAGAAAAGAAAATTTAAAGATGAGGCAGTAAAAAAGACACAAAAGAAGGCACAAGAAGGTGCAATTCATAGCCAAGTTAATGGCTAA 1605 0.448 MANASDAGVKALRRLKATDPPSWLAPNAELSEAARTASQYLFSTLKPFSPKSPLDQLLVEGFDAEQIWQQIDLQSQPLLSTLRRRLKQLAENPEEISRLKVPSESGNKVEKKSKDKWEGDSDGFDEELDEEDEEEGDEDEEKEGEEEGMEEEGEDEEEDEEEDEEEDEKEEENEEGGGIEDKFLKIDELAKYLDKEEEDFENGEGDREGEEENDDEESEEDDDFGFGDEDDEGEEAEDMESARYEDFFGGKKERGSKRKAQVLQESEYSEDEDDMEFDKQKKGTASAHEKQLEKIQSKIEQMEKANIEPKAWTMQGEVTAAKRPKNSALEVDLDFEHNVRPAPVITEEVTASIEDMIKKRIIEGLFNDVQRLPKLPSKAPREVKELDDNKSKQGLAEIYEQEYVQKTDPTSAPLSFKDEQKNEASMLFKRLCLKLDALSHFNFAPKPVIEDMSIQANVPALAMEEIAPVAVSDAAMLAPEEVFDGKGDIKEEVELTQAERKRRRANKKRKFKDEAVKKTQKKAQEGAIHSQVNG* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01132 534 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10 5 524 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Lapu3g01132 534 Coils Coil 495 515 - -
Lapu3g01132 534 MobiDBLite consensus disorder prediction 275 292 - -
Lapu3g01132 534 MobiDBLite consensus disorder prediction 122 175 - -
Lapu3g01132 534 MobiDBLite consensus disorder prediction 242 266 - -
Lapu3g01132 534 MobiDBLite consensus disorder prediction 199 241 - -
Lapu3g01132 534 Coils Coil 285 308 - -
Lapu3g01132 534 Coils Coil 146 175 - -
Lapu3g01132 534 PIRSF snoRNP_Mpp10 10 282 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Lapu3g01132 534 PIRSF snoRNP_Mpp10 194 532 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Lapu3g01132 534 MobiDBLite consensus disorder prediction 495 534 - -
Lapu3g01132 534 MobiDBLite consensus disorder prediction 104 121 - -
Lapu3g01132 534 MobiDBLite consensus disorder prediction 91 292 - -
Lapu3g01132 534 Pfam Mpp10 protein 27 518 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Lapu3g01132 534 MobiDBLite consensus disorder prediction 176 198 - -
Lapu3g01132 534 Coils Coil 193 213 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01132 K14559 - gmx:100781093 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01132 3 12205529 12212004 Lapu3g01132 3 12205529 12212004 ECH