Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01127 ATGATGAGGCCAAAGATAGTGCTGTTTGGAGATTCCATAACGGAGCAATCCATCGGAGAGAGTGGATGGGGTGTTCCGCTTGCCAATGCCTATTCCCGCAGGGCTGATGTACTTGTTCGTGGTTATGGTGGATACAACACTAAGTGGGCTATGTTCTTACTGCACCACCTCTTCCCTCTGGACTCAACTACGCCACCTATTGCTACCACAATTTTCTTCGGTGCAAACGATGCAGCTTTGTTAGGAAGAACCAGTGAAAGGCAACATGTACCTATTGAAGACTTCAAAGAGAACCTTAGAAAATTTGTTCGACACTTAAAGGAATGCTCACCAACTATGCAAATTGTGCTTATTACTCCACCTCCACTTAGTGAAAAAGGACGCCTGGCATATGCAAGATCCCTATATGGCGAGAAGGCTACCAAAGTGCCTGAAAGAACAAATGAAGTAACTGGTCAATATGCTAGCGCCTGTGTTGAAGTCGCAAATGAAATGGGCGTGTGGTATATCAATCTGTGGTCCAAAATGCAAGAAACAGATGGCTGGCAAACGAAATTTTTAAGGGATGGGTTGCATCTGACAACTGAAGGAAATACAATAGTTTACGAAGAAGTGATAAAGGTGTTCAATGAAGCAGGACTTTCTGCTGACAAGTTGCCATTTGATTTCCCTCACCACTCAAAAATTGATTCTGAACATCCTGAGAGAGCTTTCCAGCAGAATGTTTGTGATGTCCCATTGTGA 744 0.4368 MMRPKIVLFGDSITEQSIGESGWGVPLANAYSRRADVLVRGYGGYNTKWAMFLLHHLFPLDSTTPPIATTIFFGANDAALLGRTSERQHVPIEDFKENLRKFVRHLKECSPTMQIVLITPPPLSEKGRLAYARSLYGEKATKVPERTNEVTGQYASACVEVANEMGVWYINLWSKMQETDGWQTKFLRDGLHLTTEGNTIVYEEVIKVFNEAGLSADKLPFDFPHHSKIDSEHPERAFQQNVCDVPL* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01127 247 SUPERFAMILY SGNH hydrolase 3 209 - -
Lapu3g01127 247 CDD Isoamyl_acetate_hydrolase_like 5 208 - -
Lapu3g01127 247 Gene3D SGNH hydrolase 2 238 IPR036514 -
Lapu3g01127 247 Pfam GDSL-like Lipase/Acylhydrolase family 8 199 IPR013830 -
Lapu3g01127 247 FunFam isoamyl acetate-hydrolyzing esterase 1 homolog 3 236 - -
Lapu3g01127 247 PANTHER ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 2 236 IPR045136 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01127 Lapu-Chr3 12163388 12167973 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01127 K23978 - gmx:100782709 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01127 3 12163388 12167973 Lapu3g01127 3 12163388 12167973 ECH