Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01120 ATGGACCAACCAATTCATCATTCATCCGATACACCTACTTATGTTTCCGATGAAGAATCCGTGGTTTCTGATTGCGAGAGCGGGGTTTCCGCCGCCGAGGGGCCGTTTCCCGGAGCCTTTGTGCCGGCCGGTGAAGACGCCCATCACGTCCGGACTAGATTCGTCGGGAGCTTGACCCTTAACGGGTTGAGACCCGAGGTGGTCGCGATTGCCAAGAACGCGCATTCTTCCGTCATGGCGCGAGCGCGTGCTCAGTCCTTTCAGGTTTTCGCGCGCGCGGTGGCGGAATTGCGCGAGGGTCATGCCAACGTCAGGTTCGCTTGGTACGGTGCTTCCGGCAAGGAAGAGATAGCTGATATCGCTCAACATGGTTTCGGACACGCGCACAGTAACGGTTTGCGTCTCTCTCCACTGGATTACCCACTCCAAAGTGTGAAGAGCTCAGGTGTAGACAGCGACGGCGTAAGGTACTTGTTGCTGTGTAGCGTTATCTTGGGGAAGACGGAGGTTGTGCCACGTGGCTCCAATCAACGCCGTTCGAGTTCTGAGGAATATGATTCTGGGGTGGACGATCTTTTGGCTCCCAAGGAGTATGTTATTTGGTGTAACCGGATCAACACTCATGTTTTGCCCAAATATGTTTTGAGTTTCACGCTTCCTTCCTTGAAAGCGAATGTGAATATTCGGGAACCTTTGAGGCCCTCTTCGCCATGGATGCCATTCCCAGCTTTGATTTCGGTGCTTTCGAAGATTTTGCCTGTGTCTCAAGTTGCCATCATTGTCAAGATACGCAAAGATTATACAGAATTGAGGATTTCTCGATATGAGATGATACAGAGAGTGAGAAATATAGCAGGCGACAAATTGCTAGTTTCCATCATTAAATCCTTTCGAGCCAAGAAAACACCTGCAAGCTTTAAAGCAAACAAGGGGAAAGAAGGGCAAGGGGAAAGAAGAGCAAGGGGACAGCCAATAGCATGA 981 0.5066 MDQPIHHSSDTPTYVSDEESVVSDCESGVSAAEGPFPGAFVPAGEDAHHVRTRFVGSLTLNGLRPEVVAIAKNAHSSVMARARAQSFQVFARAVAELREGHANVRFAWYGASGKEEIADIAQHGFGHAHSNGLRLSPLDYPLQSVKSSGVDSDGVRYLLLCSVILGKTEVVPRGSNQRRSSSEEYDSGVDDLLAPKEYVIWCNRINTHVLPKYVLSFTLPSLKANVNIREPLRPSSPWMPFPALISVLSKILPVSQVAIIVKIRKDYTELRISRYEMIQRVRNIAGDKLLVSIIKSFRAKKTPASFKANKGKEGQGERRARGQPIA* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01120 326 ProSiteProfiles RST domain profile. 232 303 IPR022003 -
Lapu3g01120 326 MobiDBLite consensus disorder prediction 1 20 - -
Lapu3g01120 326 Pfam RCD1-SRO-TAF4 (RST) plant domain 233 298 IPR022003 -
Lapu3g01120 326 ProSiteProfiles PARP catalytic domain profile. 1 238 IPR012317 GO:0003950
Lapu3g01120 326 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 44 299 IPR044964 -
Lapu3g01120 326 Gene3D - 42 218 - -
Lapu3g01120 326 MobiDBLite consensus disorder prediction 302 326 - -
Lapu3g01120 326 SUPERFAMILY ADP-ribosylation 87 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01120 Lapu-Chr3 12095033 12099420 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01120 - - gmx:100784311 415.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01120 3 12095033 12099420 Lapu9g00731 9 9555586 9558966 PCT