Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01117 ATGGCTACACAATCGCCGCCGTCTCCTCCCACTCACACCGCCACGGACGAAAACCAAGGTTCTGAAATTGTGCAACCAGCAAATATGGATCAGCAAAACACCAGAGAAGAAGAGTCTGCTAAACCAAGTTCAACTCCCTCAGTATTTGTAAACTCACAACCGTTGAGGGAAGAACAAGTTCAGAATGCAGTGAAATTTCTGTCTCACCCAAAAGTTAGAGGTTCACCTGTCATCTATAGGCGATCATTTCTAGAGAAGAAGGGCCTTACCAAGGAGGAGATTGATGAAGCCTTTCGGCGAGTGCCAGATTCAGCTCCAACTGTTCAGACAGGTGGTGTAAATCAAGATGGGCAATTGAAATCATCATCAAACAGTCAGCAAACTCAGCAAAAAAATTTGCAGACGGGTTCACCTGCTGTTACTGGTGTTAATACTTCATCAGGAACATTATCGCGCTCCAGATTTCACTGGTCCCACGCCCTTATTGCAGTTGGATTACTGGCTGCTTCAGGTGCTGGAACAGCTATAATAATTAAGAAATCTTTTCTCCCTCGGTTAAAATCTTGGATACGTAAGGTTGTCCTTGACAATGATGATGAACAATTAAAGAAAACTGATGAGAAACCAACATTGATGGAAGAGGCTGCGCAAGCTGCAAAATCAGCTGCAGCTGCAGCTGCCGAAGTGGCAAAAACGAGCCAAGAAATTCTGGCTTCAAAAGGTGAAGAGAGGAGATACTTTGTGGAAGTTGTGAGCCTTTTAGACAAGCAAGTACAAGAAATGAAGTCAATGACAAATGCCATAAGAAGATTGGAAGGACAAGAAGATCTTCGAATCAGTCAAACAAGTTCAAAGCAACTGATTGTGAATGGTAAAGCGGACTATGACTTGCGTTCAGTGAGATCTTCATCTCCCCCTGCATCCGTTGAACCATCAAGTGGTCTTCATCCAAAGTCATATATGGAGCCTTGGGAGGTTGGTCAGGTGCAAATCACGTCTACTCAGATGCTTCAGTCTCAAGTAAATGGTCAAGACTTGAATACCAGGACCCAGGATACGTCTCTAGTGAATGGGGATGACCCATTGCCCTGGTGGCAGAGGAAAAATGTCAGAATCAGAGAGATTGACAATGAAAATGAGTCTAATGGAATACCTTATGCTGCTGCATCCAGTCAACAGCCAGTTCAACGTGTATGGGTTCCTCCTCAACCTCCACCGATAGCTATGCCTGAGGCTGCAGAAGCAATCAGACGCCCAAAGCCGGTGGCTCAAAAGGAACAGATGTCAGATAATCAGTCAGTGGCTCATTCTTCTGACACCTCTGATGACGTGCAAAGGGTCCCAAAACTTTTGGAATCTGAAGGTGCAGTAGAGGGCAGCAGTGTCAGCTCAGTTCCCAGCTCTAGTGAGATACAAGAGGAGCATGAAGTCAAATATGACGAGAAATGA 1449 0.4507 MATQSPPSPPTHTATDENQGSEIVQPANMDQQNTREEESAKPSSTPSVFVNSQPLREEQVQNAVKFLSHPKVRGSPVIYRRSFLEKKGLTKEEIDEAFRRVPDSAPTVQTGGVNQDGQLKSSSNSQQTQQKNLQTGSPAVTGVNTSSGTLSRSRFHWSHALIAVGLLAASGAGTAIIIKKSFLPRLKSWIRKVVLDNDDEQLKKTDEKPTLMEEAAQAAKSAAAAAAEVAKTSQEILASKGEERRYFVEVVSLLDKQVQEMKSMTNAIRRLEGQEDLRISQTSSKQLIVNGKADYDLRSVRSSSPPASVEPSSGLHPKSYMEPWEVGQVQITSTQMLQSQVNGQDLNTRTQDTSLVNGDDPLPWWQRKNVRIREIDNENESNGIPYAAASSQQPVQRVWVPPQPPPIAMPEAAEAIRRPKPVAQKEQMSDNQSVAHSSDTSDDVQRVPKLLESEGAVEGSSVSSVPSSSEIQEEHEVKYDEK* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01117 482 Coils Coil 254 274 - -
Lapu3g01117 482 MobiDBLite consensus disorder prediction 1 53 - -
Lapu3g01117 482 MobiDBLite consensus disorder prediction 403 482 - -
Lapu3g01117 482 Pfam Pex14 N-terminal domain 56 100 IPR006785 -
Lapu3g01117 482 MobiDBLite consensus disorder prediction 425 441 - -
Lapu3g01117 482 FunFam Peroxisomal membrane protein PEX14 48 110 - -
Lapu3g01117 482 Gene3D - 48 110 IPR036388 -
Lapu3g01117 482 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 1 476 IPR025655 GO:0005515|GO:0005778|GO:0016560
Lapu3g01117 482 MobiDBLite consensus disorder prediction 98 145 - -
Lapu3g01117 482 MobiDBLite consensus disorder prediction 107 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01117 Lapu-Chr3 12053573 12068943 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01117 K13343 - gmx:100784152 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01117 3 12053573 12068943 Lapu3g01117 3 12053573 12068943 ECH
Lapu3g01117 3 12053573 12068943 Lapu9g00733 9 9618589 9631425 PCT